Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.03■□□□□ 0.64
VPS33AQ96AX1 MYCNOS-205ENST00000641950 531 ntBASIC19.03■□□□□ 0.64
VPS33AQ96AX1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS33AQ96AX1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
VPS33AQ96AX1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
VPS33AQ96AX1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS33AQ96AX1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.03■□□□□ 0.64
VPS33AQ96AX1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS33AQ96AX1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS33AQ96AX1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VPS33AQ96AX1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VPS33AQ96AX1 CYP21A1P-202ENST00000354927 1481 ntBASIC19.03■□□□□ 0.64
VPS33AQ96AX1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.03■□□□□ 0.64
VPS33AQ96AX1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS33AQ96AX1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
VPS33AQ96AX1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS33AQ96AX1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS33AQ96AX1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS33AQ96AX1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS33AQ96AX1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VPS33AQ96AX1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS33AQ96AX1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
VPS33AQ96AX1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VPS33AQ96AX1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.02■□□□□ 0.64
VPS33AQ96AX1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS33AQ96AX1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.02■□□□□ 0.64
VPS33AQ96AX1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.02■□□□□ 0.64
VPS33AQ96AX1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VPS33AQ96AX1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VPS33AQ96AX1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VPS33AQ96AX1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.02■□□□□ 0.64
VPS33AQ96AX1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VPS33AQ96AX1 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS33AQ96AX1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS33AQ96AX1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS33AQ96AX1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS33AQ96AX1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
VPS33AQ96AX1 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS33AQ96AX1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.02■□□□□ 0.64
VPS33AQ96AX1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VPS33AQ96AX1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.02■□□□□ 0.63
VPS33AQ96AX1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
VPS33AQ96AX1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
VPS33AQ96AX1 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
VPS33AQ96AX1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
VPS33AQ96AX1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
VPS33AQ96AX1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
VPS33AQ96AX1 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
VPS33AQ96AX1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.02■□□□□ 0.63
VPS33AQ96AX1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS33AQ96AX1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.01■□□□□ 0.63
VPS33AQ96AX1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS33AQ96AX1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
VPS33AQ96AX1 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS33AQ96AX1 PTBP1P-201ENST00000554374 1601 ntBASIC19.01■□□□□ 0.63
VPS33AQ96AX1 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.01■□□□□ 0.63
VPS33AQ96AX1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VPS33AQ96AX1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
VPS33AQ96AX1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VPS33AQ96AX1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
VPS33AQ96AX1 ZNRF2P3-201ENST00000424200 374 ntBASIC19.01■□□□□ 0.63
VPS33AQ96AX1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.01■□□□□ 0.63
VPS33AQ96AX1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.01■□□□□ 0.63
VPS33AQ96AX1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VPS33AQ96AX1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS33AQ96AX1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
VPS33AQ96AX1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
VPS33AQ96AX1 AC120498.9-201ENST00000339021 3867 ntBASIC19.01■□□□□ 0.63
VPS33AQ96AX1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
VPS33AQ96AX1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.01■□□□□ 0.63
VPS33AQ96AX1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS33AQ96AX1 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS33AQ96AX1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
VPS33AQ96AX1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VPS33AQ96AX1 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS33AQ96AX1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.01■□□□□ 0.63
VPS33AQ96AX1 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS33AQ96AX1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VPS33AQ96AX1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VPS33AQ96AX1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
VPS33AQ96AX1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19■□□□□ 0.63
VPS33AQ96AX1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19■□□□□ 0.63
VPS33AQ96AX1 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VPS33AQ96AX1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VPS33AQ96AX1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
VPS33AQ96AX1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VPS33AQ96AX1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19■□□□□ 0.63
VPS33AQ96AX1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19■□□□□ 0.63
VPS33AQ96AX1 AL591742.1-201ENST00000604433 565 ntBASIC19■□□□□ 0.63
VPS33AQ96AX1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19■□□□□ 0.63
VPS33AQ96AX1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19■□□□□ 0.63
VPS33AQ96AX1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VPS33AQ96AX1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
VPS33AQ96AX1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19■□□□□ 0.63
VPS33AQ96AX1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VPS33AQ96AX1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VPS33AQ96AX1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS33AQ96AX1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS33AQ96AX1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VPS33AQ96AX1 AC009237.14-201ENST00000609975 1594 ntBASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms