Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM54Q969K7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM54Q969K7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.5■□□□□ 0.39
TMEM54Q969K7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.5■□□□□ 0.39
TMEM54Q969K7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM54Q969K7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM54Q969K7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM54Q969K7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM54Q969K7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM54Q969K7 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.5■□□□□ 0.39
TMEM54Q969K7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM54Q969K7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TMEM54Q969K7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.5■□□□□ 0.39
TMEM54Q969K7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.5■□□□□ 0.39
TMEM54Q969K7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.5■□□□□ 0.39
TMEM54Q969K7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM54Q969K7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM54Q969K7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TMEM54Q969K7 AC120498.8-201ENST00000614275 531 ntBASIC17.5■□□□□ 0.39
TMEM54Q969K7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.5■□□□□ 0.39
TMEM54Q969K7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.5■□□□□ 0.39
TMEM54Q969K7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TMEM54Q969K7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TMEM54Q969K7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM54Q969K7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM54Q969K7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM54Q969K7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM54Q969K7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.49■□□□□ 0.39
TMEM54Q969K7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.49■□□□□ 0.39
TMEM54Q969K7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM54Q969K7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM54Q969K7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM54Q969K7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM54Q969K7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM54Q969K7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM54Q969K7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TMEM54Q969K7 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM54Q969K7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.49■□□□□ 0.39
TMEM54Q969K7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.49■□□□□ 0.39
TMEM54Q969K7 UNC93B5-201ENST00000530315 699 ntBASIC17.49■□□□□ 0.39
TMEM54Q969K7 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.49■□□□□ 0.39
TMEM54Q969K7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TMEM54Q969K7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.49■□□□□ 0.39
TMEM54Q969K7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.49■□□□□ 0.39
TMEM54Q969K7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.49■□□□□ 0.39
TMEM54Q969K7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM54Q969K7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TMEM54Q969K7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.49■□□□□ 0.39
TMEM54Q969K7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.49■□□□□ 0.39
TMEM54Q969K7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.49■□□□□ 0.39
TMEM54Q969K7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM54Q969K7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM54Q969K7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TMEM54Q969K7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM54Q969K7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TMEM54Q969K7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TMEM54Q969K7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.48■□□□□ 0.39
TMEM54Q969K7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM54Q969K7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM54Q969K7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.48■□□□□ 0.39
TMEM54Q969K7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.48■□□□□ 0.39
TMEM54Q969K7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM54Q969K7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEM54Q969K7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TMEM54Q969K7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TMEM54Q969K7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM54Q969K7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM54Q969K7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEM54Q969K7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.48■□□□□ 0.39
TMEM54Q969K7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEM54Q969K7 UNC93B4-201ENST00000505679 747 ntBASIC17.48■□□□□ 0.39
TMEM54Q969K7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.48■□□□□ 0.39
TMEM54Q969K7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEM54Q969K7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.48■□□□□ 0.39
TMEM54Q969K7 AC008687.6-201ENST00000596318 630 ntBASIC17.48■□□□□ 0.39
TMEM54Q969K7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.48■□□□□ 0.39
TMEM54Q969K7 AC124283.5-201ENST00000624661 1809 ntBASIC17.48■□□□□ 0.39
TMEM54Q969K7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM54Q969K7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM54Q969K7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM54Q969K7 TFP1-202ENST00000475455 1573 ntBASIC17.48■□□□□ 0.39
TMEM54Q969K7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TMEM54Q969K7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM54Q969K7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM54Q969K7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM54Q969K7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TMEM54Q969K7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TMEM54Q969K7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TMEM54Q969K7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.47■□□□□ 0.39
TMEM54Q969K7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM54Q969K7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.47■□□□□ 0.39
TMEM54Q969K7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.47■□□□□ 0.39
TMEM54Q969K7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM54Q969K7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TMEM54Q969K7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM54Q969K7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.47■□□□□ 0.39
TMEM54Q969K7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM54Q969K7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.47■□□□□ 0.39
TMEM54Q969K7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM54Q969K7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms