Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.54■□□□□ 0.56
CT55Q8WUE5 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CT55Q8WUE5 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CT55Q8WUE5 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CT55Q8WUE5 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CT55Q8WUE5 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CT55Q8WUE5 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CT55Q8WUE5 YBX1P10-201ENST00000444752 975 ntBASIC18.54■□□□□ 0.56
CT55Q8WUE5 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.54■□□□□ 0.56
CT55Q8WUE5 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CT55Q8WUE5 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.54■□□□□ 0.56
CT55Q8WUE5 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CT55Q8WUE5 FITM1-202ENST00000559294 800 ntBASIC18.54■□□□□ 0.56
CT55Q8WUE5 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.54■□□□□ 0.56
CT55Q8WUE5 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.54■□□□□ 0.56
CT55Q8WUE5 AC005363.2-201ENST00000618631 242 ntBASIC18.54■□□□□ 0.56
CT55Q8WUE5 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CT55Q8WUE5 AL031985.4-201ENST00000642138 673 ntBASIC18.54■□□□□ 0.56
CT55Q8WUE5 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.54■□□□□ 0.56
CT55Q8WUE5 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.54■□□□□ 0.56
CT55Q8WUE5 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CT55Q8WUE5 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CT55Q8WUE5 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CT55Q8WUE5 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CT55Q8WUE5 LINC01568-207ENST00000641790 1380 ntBASIC18.54■□□□□ 0.56
CT55Q8WUE5 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.53■□□□□ 0.56
CT55Q8WUE5 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CT55Q8WUE5 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.53■□□□□ 0.56
CT55Q8WUE5 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CT55Q8WUE5 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CT55Q8WUE5 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CT55Q8WUE5 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.53■□□□□ 0.56
CT55Q8WUE5 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CT55Q8WUE5 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.53■□□□□ 0.56
CT55Q8WUE5 NAPSB-206ENST00000562112 1266 ntBASIC18.53■□□□□ 0.56
CT55Q8WUE5 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CT55Q8WUE5 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CT55Q8WUE5 CYP2D8P-201ENST00000433633 1490 ntBASIC18.52■□□□□ 0.56
CT55Q8WUE5 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CT55Q8WUE5 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.52■□□□□ 0.56
CT55Q8WUE5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CT55Q8WUE5 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
CT55Q8WUE5 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.52■□□□□ 0.56
CT55Q8WUE5 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CT55Q8WUE5 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
CT55Q8WUE5 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CT55Q8WUE5 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CT55Q8WUE5 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.52■□□□□ 0.56
CT55Q8WUE5 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.52■□□□□ 0.56
CT55Q8WUE5 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CT55Q8WUE5 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CT55Q8WUE5 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.52■□□□□ 0.56
CT55Q8WUE5 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CT55Q8WUE5 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CT55Q8WUE5 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CT55Q8WUE5 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.52■□□□□ 0.55
CT55Q8WUE5 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
CT55Q8WUE5 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CT55Q8WUE5 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CT55Q8WUE5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CT55Q8WUE5 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CT55Q8WUE5 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CT55Q8WUE5 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CT55Q8WUE5 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CT55Q8WUE5 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CT55Q8WUE5 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CT55Q8WUE5 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.51■□□□□ 0.55
CT55Q8WUE5 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CT55Q8WUE5 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.51■□□□□ 0.55
CT55Q8WUE5 KRT18P16-201ENST00000510337 1294 ntBASIC18.51■□□□□ 0.55
CT55Q8WUE5 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CT55Q8WUE5 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.51■□□□□ 0.55
CT55Q8WUE5 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.51■□□□□ 0.55
CT55Q8WUE5 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CT55Q8WUE5 AL445675.2-201ENST00000620291 557 ntBASIC18.51■□□□□ 0.55
CT55Q8WUE5 AC010947.1-201ENST00000623454 693 ntBASIC18.51■□□□□ 0.55
CT55Q8WUE5 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CT55Q8WUE5 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.51■□□□□ 0.55
CT55Q8WUE5 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CT55Q8WUE5 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.51■□□□□ 0.55
CT55Q8WUE5 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CT55Q8WUE5 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CT55Q8WUE5 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CT55Q8WUE5 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CT55Q8WUE5 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CT55Q8WUE5 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CT55Q8WUE5 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.5■□□□□ 0.55
CT55Q8WUE5 AC005521.1-201ENST00000393351 872 ntBASIC18.5■□□□□ 0.55
CT55Q8WUE5 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.5■□□□□ 0.55
CT55Q8WUE5 TUBB8P6-201ENST00000436895 1288 ntBASIC18.5■□□□□ 0.55
CT55Q8WUE5 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.5■□□□□ 0.55
CT55Q8WUE5 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.5■□□□□ 0.55
CT55Q8WUE5 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.5■□□□□ 0.55
CT55Q8WUE5 AC026271.3-201ENST00000571884 352 ntBASIC18.5■□□□□ 0.55
CT55Q8WUE5 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.5■□□□□ 0.55
CT55Q8WUE5 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CT55Q8WUE5 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.5■□□□□ 0.55
CT55Q8WUE5 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CT55Q8WUE5 AC092865.7-201ENST00000641832 219 ntBASIC18.5■□□□□ 0.55
CT55Q8WUE5 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms