Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAF3IP1Q8TDR0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.67■□□□□ 0.9
TRAF3IP1Q8TDR0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.67■□□□□ 0.9
TRAF3IP1Q8TDR0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.67■□□□□ 0.9
TRAF3IP1Q8TDR0 AL050303.2-201ENST00000619798 666 ntBASIC20.67■□□□□ 0.9
TRAF3IP1Q8TDR0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.67■□□□□ 0.9
TRAF3IP1Q8TDR0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.67■□□□□ 0.9
TRAF3IP1Q8TDR0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
TRAF3IP1Q8TDR0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.67■□□□□ 0.9
TRAF3IP1Q8TDR0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TRAF3IP1Q8TDR0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAF3IP1Q8TDR0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TRAF3IP1Q8TDR0 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAF3IP1Q8TDR0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAF3IP1Q8TDR0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAF3IP1Q8TDR0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAF3IP1Q8TDR0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TRAF3IP1Q8TDR0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAF3IP1Q8TDR0 AC006970.2-201ENST00000450065 779 ntBASIC20.66■□□□□ 0.9
TRAF3IP1Q8TDR0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAF3IP1Q8TDR0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRAF3IP1Q8TDR0 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRAF3IP1Q8TDR0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAF3IP1Q8TDR0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAF3IP1Q8TDR0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRAF3IP1Q8TDR0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.66■□□□□ 0.9
TRAF3IP1Q8TDR0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TRAF3IP1Q8TDR0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAF3IP1Q8TDR0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TRAF3IP1Q8TDR0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAF3IP1Q8TDR0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
TRAF3IP1Q8TDR0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAF3IP1Q8TDR0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TRAF3IP1Q8TDR0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAF3IP1Q8TDR0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAF3IP1Q8TDR0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAF3IP1Q8TDR0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.65■□□□□ 0.9
TRAF3IP1Q8TDR0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TRAF3IP1Q8TDR0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAF3IP1Q8TDR0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAF3IP1Q8TDR0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRAF3IP1Q8TDR0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
TRAF3IP1Q8TDR0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.65■□□□□ 0.9
TRAF3IP1Q8TDR0 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.65■□□□□ 0.9
TRAF3IP1Q8TDR0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
TRAF3IP1Q8TDR0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.65■□□□□ 0.9
TRAF3IP1Q8TDR0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TRAF3IP1Q8TDR0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.65■□□□□ 0.9
TRAF3IP1Q8TDR0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRAF3IP1Q8TDR0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.65■□□□□ 0.9
TRAF3IP1Q8TDR0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.65■□□□□ 0.9
TRAF3IP1Q8TDR0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
TRAF3IP1Q8TDR0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.65■□□□□ 0.9
TRAF3IP1Q8TDR0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRAF3IP1Q8TDR0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRAF3IP1Q8TDR0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRAF3IP1Q8TDR0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAF3IP1Q8TDR0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAF3IP1Q8TDR0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAF3IP1Q8TDR0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAF3IP1Q8TDR0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TRAF3IP1Q8TDR0 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAF3IP1Q8TDR0 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.64■□□□□ 0.89
TRAF3IP1Q8TDR0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TRAF3IP1Q8TDR0 BX276092.2-201ENST00000417668 665 ntBASIC20.64■□□□□ 0.89
TRAF3IP1Q8TDR0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRAF3IP1Q8TDR0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.64■□□□□ 0.89
TRAF3IP1Q8TDR0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAF3IP1Q8TDR0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAF3IP1Q8TDR0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TRAF3IP1Q8TDR0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.64■□□□□ 0.89
TRAF3IP1Q8TDR0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRAF3IP1Q8TDR0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAF3IP1Q8TDR0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAF3IP1Q8TDR0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TRAF3IP1Q8TDR0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.64■□□□□ 0.89
TRAF3IP1Q8TDR0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAF3IP1Q8TDR0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.64■□□□□ 0.89
TRAF3IP1Q8TDR0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAF3IP1Q8TDR0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAF3IP1Q8TDR0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAF3IP1Q8TDR0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRAF3IP1Q8TDR0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAF3IP1Q8TDR0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAF3IP1Q8TDR0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TRAF3IP1Q8TDR0 CROCCP5-201ENST00000436658 830 ntBASIC20.63■□□□□ 0.89
TRAF3IP1Q8TDR0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.63■□□□□ 0.89
TRAF3IP1Q8TDR0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.63■□□□□ 0.89
TRAF3IP1Q8TDR0 RAP2CP1-201ENST00000605103 478 ntBASIC20.63■□□□□ 0.89
TRAF3IP1Q8TDR0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRAF3IP1Q8TDR0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAF3IP1Q8TDR0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAF3IP1Q8TDR0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.63■□□□□ 0.89
TRAF3IP1Q8TDR0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAF3IP1Q8TDR0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TRAF3IP1Q8TDR0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.62■□□□□ 0.89
TRAF3IP1Q8TDR0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAF3IP1Q8TDR0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TRAF3IP1Q8TDR0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.62■□□□□ 0.89
TRAF3IP1Q8TDR0 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms