Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC124283.5-201ENST00000624661 1809 ntBASIC21.32■■□□□ 1
LMO3Q8TAP4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
LMO3Q8TAP4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.32■■□□□ 1
LMO3Q8TAP4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
LMO3Q8TAP4 AL390719.1-204ENST00000412397 1219 ntBASIC21.32■■□□□ 1
LMO3Q8TAP4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.32■■□□□ 1
LMO3Q8TAP4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LMO3Q8TAP4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LMO3Q8TAP4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.32■■□□□ 1
LMO3Q8TAP4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LMO3Q8TAP4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.32■■□□□ 1
LMO3Q8TAP4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LMO3Q8TAP4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
LMO3Q8TAP4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.32■■□□□ 1
LMO3Q8TAP4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.32■■□□□ 1
LMO3Q8TAP4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LMO3Q8TAP4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.32■■□□□ 1
LMO3Q8TAP4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LMO3Q8TAP4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LMO3Q8TAP4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.32■■□□□ 1
LMO3Q8TAP4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LMO3Q8TAP4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
LMO3Q8TAP4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LMO3Q8TAP4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.31■■□□□ 1
LMO3Q8TAP4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.31■■□□□ 1
LMO3Q8TAP4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.31■■□□□ 1
LMO3Q8TAP4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.31■■□□□ 1
LMO3Q8TAP4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LMO3Q8TAP4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.31■■□□□ 1
LMO3Q8TAP4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.31■■□□□ 1
LMO3Q8TAP4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
LMO3Q8TAP4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.31■■□□□ 1
LMO3Q8TAP4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.31■■□□□ 1
LMO3Q8TAP4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.31■■□□□ 1
LMO3Q8TAP4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
LMO3Q8TAP4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.31■■□□□ 1
LMO3Q8TAP4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.31■■□□□ 1
LMO3Q8TAP4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.31■■□□□ 1
LMO3Q8TAP4 TFP1-202ENST00000475455 1573 ntBASIC21.31■■□□□ 1
LMO3Q8TAP4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
LMO3Q8TAP4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LMO3Q8TAP4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.3■■□□□ 1
LMO3Q8TAP4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LMO3Q8TAP4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LMO3Q8TAP4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LMO3Q8TAP4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LMO3Q8TAP4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LMO3Q8TAP4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
LMO3Q8TAP4 AL355802.2-201ENST00000402069 882 ntBASIC21.3■■□□□ 1
LMO3Q8TAP4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
LMO3Q8TAP4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.3■■□□□ 1
LMO3Q8TAP4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.3■■□□□ 1
LMO3Q8TAP4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.3■■□□□ 1
LMO3Q8TAP4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.3■■□□□ 1
LMO3Q8TAP4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.3■■□□□ 1
LMO3Q8TAP4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.3■■□□□ 1
LMO3Q8TAP4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
LMO3Q8TAP4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.3■■□□□ 1
LMO3Q8TAP4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.3■■□□□ 1
LMO3Q8TAP4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.29■■□□□ 1
LMO3Q8TAP4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.29■■□□□ 1
LMO3Q8TAP4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.29■■□□□ 1
LMO3Q8TAP4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.29■■□□□ 1
LMO3Q8TAP4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.29■■□□□ 1
LMO3Q8TAP4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.29■■□□□ 1
LMO3Q8TAP4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.29■■□□□ 1
LMO3Q8TAP4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.29■■□□□ 1
LMO3Q8TAP4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LMO3Q8TAP4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.29■■□□□ 1
LMO3Q8TAP4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.29■■□□□ 1
LMO3Q8TAP4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LMO3Q8TAP4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.29■■□□□ 1
LMO3Q8TAP4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.29■■□□□ 1
LMO3Q8TAP4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
LMO3Q8TAP4 PKD1P6-201ENST00000343738 4769 ntBASIC21.29■■□□□ 1
LMO3Q8TAP4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.29■■□□□ 1
LMO3Q8TAP4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LMO3Q8TAP4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.29■■□□□ 1
LMO3Q8TAP4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LMO3Q8TAP4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.28■■□□□ 1
LMO3Q8TAP4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
LMO3Q8TAP4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LMO3Q8TAP4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.28■■□□□ 1
LMO3Q8TAP4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
LMO3Q8TAP4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.28■■□□□ 1
LMO3Q8TAP4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
LMO3Q8TAP4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LMO3Q8TAP4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
LMO3Q8TAP4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LMO3Q8TAP4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.28■■□□□ 1
LMO3Q8TAP4 RPS2P52-201ENST00000469610 820 ntBASIC21.28■■□□□ 1
LMO3Q8TAP4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.28■■□□□ 1
LMO3Q8TAP4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.28■■□□□ 1
LMO3Q8TAP4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.28■■□□□ 1
LMO3Q8TAP4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.28■■□□□ 1
LMO3Q8TAP4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.28■■□□□ 1
LMO3Q8TAP4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
LMO3Q8TAP4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LMO3Q8TAP4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LMO3Q8TAP4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms