Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIMC1Q8NDZ2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SIMC1Q8NDZ2 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.68■□□□□ 0.58
SIMC1Q8NDZ2 AC097658.1-201ENST00000475555 843 ntBASIC18.68■□□□□ 0.58
SIMC1Q8NDZ2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.68■□□□□ 0.58
SIMC1Q8NDZ2 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.68■□□□□ 0.58
SIMC1Q8NDZ2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.68■□□□□ 0.58
SIMC1Q8NDZ2 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIMC1Q8NDZ2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIMC1Q8NDZ2 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIMC1Q8NDZ2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SIMC1Q8NDZ2 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SIMC1Q8NDZ2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIMC1Q8NDZ2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIMC1Q8NDZ2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIMC1Q8NDZ2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.68■□□□□ 0.58
SIMC1Q8NDZ2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIMC1Q8NDZ2 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SIMC1Q8NDZ2 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIMC1Q8NDZ2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIMC1Q8NDZ2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIMC1Q8NDZ2 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.67■□□□□ 0.58
SIMC1Q8NDZ2 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.67■□□□□ 0.58
SIMC1Q8NDZ2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIMC1Q8NDZ2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SIMC1Q8NDZ2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SIMC1Q8NDZ2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIMC1Q8NDZ2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.67■□□□□ 0.58
SIMC1Q8NDZ2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SIMC1Q8NDZ2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIMC1Q8NDZ2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIMC1Q8NDZ2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIMC1Q8NDZ2 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.67■□□□□ 0.58
SIMC1Q8NDZ2 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIMC1Q8NDZ2 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIMC1Q8NDZ2 AC073210.2-201ENST00000430369 194 ntBASIC18.67■□□□□ 0.58
SIMC1Q8NDZ2 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.67■□□□□ 0.58
SIMC1Q8NDZ2 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.67■□□□□ 0.58
SIMC1Q8NDZ2 AC133041.1-202ENST00000642053 222 ntBASIC18.67■□□□□ 0.58
SIMC1Q8NDZ2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIMC1Q8NDZ2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SIMC1Q8NDZ2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SIMC1Q8NDZ2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SIMC1Q8NDZ2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SIMC1Q8NDZ2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIMC1Q8NDZ2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SIMC1Q8NDZ2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIMC1Q8NDZ2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SIMC1Q8NDZ2 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIMC1Q8NDZ2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIMC1Q8NDZ2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIMC1Q8NDZ2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.66■□□□□ 0.58
SIMC1Q8NDZ2 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SIMC1Q8NDZ2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIMC1Q8NDZ2 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SIMC1Q8NDZ2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIMC1Q8NDZ2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.66■□□□□ 0.58
SIMC1Q8NDZ2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.66■□□□□ 0.58
SIMC1Q8NDZ2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIMC1Q8NDZ2 ABHD17AP1-201ENST00000358206 933 ntBASIC18.66■□□□□ 0.58
SIMC1Q8NDZ2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIMC1Q8NDZ2 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SIMC1Q8NDZ2 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SIMC1Q8NDZ2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.66■□□□□ 0.58
SIMC1Q8NDZ2 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SIMC1Q8NDZ2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIMC1Q8NDZ2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.66■□□□□ 0.58
SIMC1Q8NDZ2 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SIMC1Q8NDZ2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIMC1Q8NDZ2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.66■□□□□ 0.58
SIMC1Q8NDZ2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SIMC1Q8NDZ2 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SIMC1Q8NDZ2 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.66■□□□□ 0.58
SIMC1Q8NDZ2 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.66■□□□□ 0.58
SIMC1Q8NDZ2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SIMC1Q8NDZ2 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIMC1Q8NDZ2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
SIMC1Q8NDZ2 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.65■□□□□ 0.58
SIMC1Q8NDZ2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIMC1Q8NDZ2 AC087289.5-201ENST00000586076 3175 ntBASIC18.65■□□□□ 0.58
SIMC1Q8NDZ2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SIMC1Q8NDZ2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIMC1Q8NDZ2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIMC1Q8NDZ2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.65■□□□□ 0.58
SIMC1Q8NDZ2 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.65■□□□□ 0.58
SIMC1Q8NDZ2 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.65■□□□□ 0.58
SIMC1Q8NDZ2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIMC1Q8NDZ2 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIMC1Q8NDZ2 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIMC1Q8NDZ2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIMC1Q8NDZ2 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.65■□□□□ 0.58
SIMC1Q8NDZ2 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.65■□□□□ 0.58
SIMC1Q8NDZ2 AL031963.3-201ENST00000606441 850 ntBASIC18.65■□□□□ 0.58
SIMC1Q8NDZ2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIMC1Q8NDZ2 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SIMC1Q8NDZ2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SIMC1Q8NDZ2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SIMC1Q8NDZ2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SIMC1Q8NDZ2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SIMC1Q8NDZ2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms