Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNEP1R1Q8N9A8 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNEP1R1Q8N9A8 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.63■□□□□ 0.41
CNEP1R1Q8N9A8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNEP1R1Q8N9A8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNEP1R1Q8N9A8 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNEP1R1Q8N9A8 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNEP1R1Q8N9A8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNEP1R1Q8N9A8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNEP1R1Q8N9A8 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNEP1R1Q8N9A8 RPS2P55-201ENST00000397318 883 ntBASIC17.63■□□□□ 0.41
CNEP1R1Q8N9A8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CNEP1R1Q8N9A8 AC107956.1-201ENST00000494359 873 ntBASIC17.63■□□□□ 0.41
CNEP1R1Q8N9A8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNEP1R1Q8N9A8 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.63■□□□□ 0.41
CNEP1R1Q8N9A8 MIR4497-201ENST00000583208 89 ntBASIC17.63■□□□□ 0.41
CNEP1R1Q8N9A8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.63■□□□□ 0.41
CNEP1R1Q8N9A8 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNEP1R1Q8N9A8 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNEP1R1Q8N9A8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.63■□□□□ 0.41
CNEP1R1Q8N9A8 AP001412.1-201ENST00000608405 714 ntBASIC17.63■□□□□ 0.41
CNEP1R1Q8N9A8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNEP1R1Q8N9A8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.63■□□□□ 0.41
CNEP1R1Q8N9A8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNEP1R1Q8N9A8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNEP1R1Q8N9A8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.63■□□□□ 0.41
CNEP1R1Q8N9A8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNEP1R1Q8N9A8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
CNEP1R1Q8N9A8 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNEP1R1Q8N9A8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNEP1R1Q8N9A8 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNEP1R1Q8N9A8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNEP1R1Q8N9A8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNEP1R1Q8N9A8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNEP1R1Q8N9A8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNEP1R1Q8N9A8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.62■□□□□ 0.41
CNEP1R1Q8N9A8 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CNEP1R1Q8N9A8 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNEP1R1Q8N9A8 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CNEP1R1Q8N9A8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNEP1R1Q8N9A8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.62■□□□□ 0.41
CNEP1R1Q8N9A8 AC012618.2-201ENST00000428058 849 ntBASIC17.62■□□□□ 0.41
CNEP1R1Q8N9A8 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.62■□□□□ 0.41
CNEP1R1Q8N9A8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.62■□□□□ 0.41
CNEP1R1Q8N9A8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CNEP1R1Q8N9A8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.62■□□□□ 0.41
CNEP1R1Q8N9A8 AC004264.1-201ENST00000608354 794 ntBASIC17.62■□□□□ 0.41
CNEP1R1Q8N9A8 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CNEP1R1Q8N9A8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.62■□□□□ 0.41
CNEP1R1Q8N9A8 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNEP1R1Q8N9A8 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.62■□□□□ 0.41
CNEP1R1Q8N9A8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CNEP1R1Q8N9A8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNEP1R1Q8N9A8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNEP1R1Q8N9A8 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNEP1R1Q8N9A8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CNEP1R1Q8N9A8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.61■□□□□ 0.41
CNEP1R1Q8N9A8 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNEP1R1Q8N9A8 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CNEP1R1Q8N9A8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNEP1R1Q8N9A8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CNEP1R1Q8N9A8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CNEP1R1Q8N9A8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.61■□□□□ 0.41
CNEP1R1Q8N9A8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNEP1R1Q8N9A8 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CNEP1R1Q8N9A8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CNEP1R1Q8N9A8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.61■□□□□ 0.41
CNEP1R1Q8N9A8 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.61■□□□□ 0.41
CNEP1R1Q8N9A8 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.61■□□□□ 0.41
CNEP1R1Q8N9A8 AC233702.5-201ENST00000584107 538 ntBASIC17.61■□□□□ 0.41
CNEP1R1Q8N9A8 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CNEP1R1Q8N9A8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CNEP1R1Q8N9A8 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNEP1R1Q8N9A8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNEP1R1Q8N9A8 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.61■□□□□ 0.41
CNEP1R1Q8N9A8 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNEP1R1Q8N9A8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.61■□□□□ 0.41
CNEP1R1Q8N9A8 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CNEP1R1Q8N9A8 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CNEP1R1Q8N9A8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CNEP1R1Q8N9A8 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.6■□□□□ 0.41
CNEP1R1Q8N9A8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
CNEP1R1Q8N9A8 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNEP1R1Q8N9A8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.6■□□□□ 0.41
CNEP1R1Q8N9A8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CNEP1R1Q8N9A8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNEP1R1Q8N9A8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CNEP1R1Q8N9A8 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.6■□□□□ 0.41
CNEP1R1Q8N9A8 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.6■□□□□ 0.41
CNEP1R1Q8N9A8 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CNEP1R1Q8N9A8 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.6■□□□□ 0.41
CNEP1R1Q8N9A8 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNEP1R1Q8N9A8 AC138932.1-201ENST00000534164 6830 ntBASIC17.6■□□□□ 0.41
CNEP1R1Q8N9A8 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNEP1R1Q8N9A8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CNEP1R1Q8N9A8 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CNEP1R1Q8N9A8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CNEP1R1Q8N9A8 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNEP1R1Q8N9A8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNEP1R1Q8N9A8 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms