Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.61■□□□□ 0.89
NPAS3Q8IXF0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.61■□□□□ 0.89
NPAS3Q8IXF0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.61■□□□□ 0.89
NPAS3Q8IXF0 AL031985.4-201ENST00000642138 673 ntBASIC20.61■□□□□ 0.89
NPAS3Q8IXF0 AC007375.3-201ENST00000600936 2314 ntBASIC20.61■□□□□ 0.89
NPAS3Q8IXF0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.61■□□□□ 0.89
NPAS3Q8IXF0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NPAS3Q8IXF0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.61■□□□□ 0.89
NPAS3Q8IXF0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPAS3Q8IXF0 AC005229.4-201ENST00000610085 2198 ntBASIC20.61■□□□□ 0.89
NPAS3Q8IXF0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NPAS3Q8IXF0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.6■□□□□ 0.89
NPAS3Q8IXF0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPAS3Q8IXF0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NPAS3Q8IXF0 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.6■□□□□ 0.89
NPAS3Q8IXF0 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.6■□□□□ 0.89
NPAS3Q8IXF0 SLC25A3P1-201ENST00000443844 931 ntBASIC20.6■□□□□ 0.89
NPAS3Q8IXF0 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.6■□□□□ 0.89
NPAS3Q8IXF0 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.6■□□□□ 0.89
NPAS3Q8IXF0 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
NPAS3Q8IXF0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
NPAS3Q8IXF0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPAS3Q8IXF0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.6■□□□□ 0.89
NPAS3Q8IXF0 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPAS3Q8IXF0 AC073508.3-201ENST00000619697 1419 ntBASIC20.6■□□□□ 0.89
NPAS3Q8IXF0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPAS3Q8IXF0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPAS3Q8IXF0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPAS3Q8IXF0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPAS3Q8IXF0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.59■□□□□ 0.89
NPAS3Q8IXF0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPAS3Q8IXF0 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPAS3Q8IXF0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.59■□□□□ 0.89
NPAS3Q8IXF0 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.59■□□□□ 0.89
NPAS3Q8IXF0 MESTP1-201ENST00000404287 994 ntBASIC20.59■□□□□ 0.89
NPAS3Q8IXF0 AL137013.1-201ENST00000432946 1228 ntBASIC20.59■□□□□ 0.89
NPAS3Q8IXF0 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.59■□□□□ 0.89
NPAS3Q8IXF0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.59■□□□□ 0.89
NPAS3Q8IXF0 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.59■□□□□ 0.89
NPAS3Q8IXF0 AC026271.3-201ENST00000571884 352 ntBASIC20.59■□□□□ 0.89
NPAS3Q8IXF0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.59■□□□□ 0.89
NPAS3Q8IXF0 AL445675.2-201ENST00000620291 557 ntBASIC20.59■□□□□ 0.89
NPAS3Q8IXF0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NPAS3Q8IXF0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
NPAS3Q8IXF0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
NPAS3Q8IXF0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NPAS3Q8IXF0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPAS3Q8IXF0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NPAS3Q8IXF0 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPAS3Q8IXF0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
NPAS3Q8IXF0 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPAS3Q8IXF0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.58■□□□□ 0.89
NPAS3Q8IXF0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.58■□□□□ 0.89
NPAS3Q8IXF0 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.58■□□□□ 0.89
NPAS3Q8IXF0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPAS3Q8IXF0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.58■□□□□ 0.89
NPAS3Q8IXF0 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.58■□□□□ 0.89
NPAS3Q8IXF0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
NPAS3Q8IXF0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.58■□□□□ 0.89
NPAS3Q8IXF0 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.58■□□□□ 0.89
NPAS3Q8IXF0 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.58■□□□□ 0.89
NPAS3Q8IXF0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPAS3Q8IXF0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.58■□□□□ 0.88
NPAS3Q8IXF0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
NPAS3Q8IXF0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
NPAS3Q8IXF0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.58■□□□□ 0.88
NPAS3Q8IXF0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NPAS3Q8IXF0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.58■□□□□ 0.88
NPAS3Q8IXF0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NPAS3Q8IXF0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.57■□□□□ 0.88
NPAS3Q8IXF0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
NPAS3Q8IXF0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
NPAS3Q8IXF0 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NPAS3Q8IXF0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NPAS3Q8IXF0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NPAS3Q8IXF0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.57■□□□□ 0.88
NPAS3Q8IXF0 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.57■□□□□ 0.88
NPAS3Q8IXF0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
NPAS3Q8IXF0 AC116351.2-201ENST00000606540 1585 ntBASIC20.57■□□□□ 0.88
NPAS3Q8IXF0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NPAS3Q8IXF0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NPAS3Q8IXF0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NPAS3Q8IXF0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
NPAS3Q8IXF0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
NPAS3Q8IXF0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
NPAS3Q8IXF0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NPAS3Q8IXF0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NPAS3Q8IXF0 FSCN1P1-201ENST00000568912 1481 ntBASIC20.56■□□□□ 0.88
NPAS3Q8IXF0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPAS3Q8IXF0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
NPAS3Q8IXF0 FP700111.2-201ENST00000619190 1892 ntBASIC20.56■□□□□ 0.88
NPAS3Q8IXF0 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPAS3Q8IXF0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPAS3Q8IXF0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
NPAS3Q8IXF0 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPAS3Q8IXF0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.56■□□□□ 0.88
NPAS3Q8IXF0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NPAS3Q8IXF0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.56■□□□□ 0.88
NPAS3Q8IXF0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
NPAS3Q8IXF0 DPP3P2-201ENST00000416030 1696 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms