Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.35■□□□□ 0.53
VRK2Q86Y07 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VRK2Q86Y07 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
VRK2Q86Y07 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.34■□□□□ 0.53
VRK2Q86Y07 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VRK2Q86Y07 MKRN4P-201ENST00000444706 1521 ntBASIC18.34■□□□□ 0.53
VRK2Q86Y07 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
VRK2Q86Y07 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.34■□□□□ 0.53
VRK2Q86Y07 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.34■□□□□ 0.53
VRK2Q86Y07 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VRK2Q86Y07 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.34■□□□□ 0.53
VRK2Q86Y07 AF201337.1-201ENST00000520239 748 ntBASIC18.34■□□□□ 0.53
VRK2Q86Y07 RAP2CP1-201ENST00000605103 478 ntBASIC18.34■□□□□ 0.53
VRK2Q86Y07 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
VRK2Q86Y07 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VRK2Q86Y07 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
VRK2Q86Y07 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VRK2Q86Y07 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VRK2Q86Y07 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.34■□□□□ 0.53
VRK2Q86Y07 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VRK2Q86Y07 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VRK2Q86Y07 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VRK2Q86Y07 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
VRK2Q86Y07 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VRK2Q86Y07 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
VRK2Q86Y07 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.33■□□□□ 0.53
VRK2Q86Y07 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VRK2Q86Y07 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
VRK2Q86Y07 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.33■□□□□ 0.53
VRK2Q86Y07 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
VRK2Q86Y07 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VRK2Q86Y07 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
VRK2Q86Y07 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VRK2Q86Y07 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VRK2Q86Y07 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
VRK2Q86Y07 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VRK2Q86Y07 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.33■□□□□ 0.52
VRK2Q86Y07 CROCCP5-201ENST00000436658 830 ntBASIC18.33■□□□□ 0.52
VRK2Q86Y07 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.33■□□□□ 0.52
VRK2Q86Y07 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.33■□□□□ 0.52
VRK2Q86Y07 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VRK2Q86Y07 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VRK2Q86Y07 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.33■□□□□ 0.52
VRK2Q86Y07 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.33■□□□□ 0.52
VRK2Q86Y07 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VRK2Q86Y07 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VRK2Q86Y07 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
VRK2Q86Y07 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.33■□□□□ 0.52
VRK2Q86Y07 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VRK2Q86Y07 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
VRK2Q86Y07 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VRK2Q86Y07 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VRK2Q86Y07 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VRK2Q86Y07 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VRK2Q86Y07 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VRK2Q86Y07 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VRK2Q86Y07 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.32■□□□□ 0.52
VRK2Q86Y07 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VRK2Q86Y07 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.32■□□□□ 0.52
VRK2Q86Y07 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
VRK2Q86Y07 BX276092.2-201ENST00000417668 665 ntBASIC18.32■□□□□ 0.52
VRK2Q86Y07 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VRK2Q86Y07 AC023632.3-201ENST00000521633 145 ntBASIC18.32■□□□□ 0.52
VRK2Q86Y07 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.32■□□□□ 0.52
VRK2Q86Y07 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.32■□□□□ 0.52
VRK2Q86Y07 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VRK2Q86Y07 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VRK2Q86Y07 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VRK2Q86Y07 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VRK2Q86Y07 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VRK2Q86Y07 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.32■□□□□ 0.52
VRK2Q86Y07 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.32■□□□□ 0.52
VRK2Q86Y07 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VRK2Q86Y07 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
VRK2Q86Y07 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VRK2Q86Y07 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
VRK2Q86Y07 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.31■□□□□ 0.52
VRK2Q86Y07 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VRK2Q86Y07 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.31■□□□□ 0.52
VRK2Q86Y07 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VRK2Q86Y07 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
VRK2Q86Y07 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
VRK2Q86Y07 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VRK2Q86Y07 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VRK2Q86Y07 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VRK2Q86Y07 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VRK2Q86Y07 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.31■□□□□ 0.52
VRK2Q86Y07 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
VRK2Q86Y07 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VRK2Q86Y07 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
VRK2Q86Y07 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.31■□□□□ 0.52
VRK2Q86Y07 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VRK2Q86Y07 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
VRK2Q86Y07 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VRK2Q86Y07 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VRK2Q86Y07 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VRK2Q86Y07 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VRK2Q86Y07 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VRK2Q86Y07 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
VRK2Q86Y07 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms