Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
LRRTM4Q86VH4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.49■□□□□ 0.71
LRRTM4Q86VH4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRTM4Q86VH4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRRTM4Q86VH4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRTM4Q86VH4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 AC110285.5-201ENST00000611501 352 ntBASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 AC018553.1-201ENST00000616682 1458 ntBASIC19.48■□□□□ 0.71
LRRTM4Q86VH4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRTM4Q86VH4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRTM4Q86VH4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.47■□□□□ 0.71
LRRTM4Q86VH4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
LRRTM4Q86VH4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.47■□□□□ 0.71
LRRTM4Q86VH4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRTM4Q86VH4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRTM4Q86VH4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.47■□□□□ 0.71
LRRTM4Q86VH4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.47■□□□□ 0.71
LRRTM4Q86VH4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRRTM4Q86VH4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRTM4Q86VH4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.47■□□□□ 0.71
LRRTM4Q86VH4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRTM4Q86VH4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRTM4Q86VH4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
LRRTM4Q86VH4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRTM4Q86VH4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
LRRTM4Q86VH4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.47■□□□□ 0.71
LRRTM4Q86VH4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRRTM4Q86VH4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.47■□□□□ 0.71
LRRTM4Q86VH4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.47■□□□□ 0.71
LRRTM4Q86VH4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.47■□□□□ 0.71
LRRTM4Q86VH4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.47■□□□□ 0.71
LRRTM4Q86VH4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
LRRTM4Q86VH4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
LRRTM4Q86VH4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRTM4Q86VH4 NBPF21P-201ENST00000425093 1451 ntBASIC19.47■□□□□ 0.71
LRRTM4Q86VH4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRTM4Q86VH4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRTM4Q86VH4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRTM4Q86VH4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
LRRTM4Q86VH4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
LRRTM4Q86VH4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
LRRTM4Q86VH4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
LRRTM4Q86VH4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRTM4Q86VH4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRRTM4Q86VH4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRTM4Q86VH4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRTM4Q86VH4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.46■□□□□ 0.71
LRRTM4Q86VH4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.46■□□□□ 0.71
LRRTM4Q86VH4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
LRRTM4Q86VH4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.46■□□□□ 0.71
LRRTM4Q86VH4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.46■□□□□ 0.71
LRRTM4Q86VH4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.46■□□□□ 0.71
LRRTM4Q86VH4 AP006294.2-201ENST00000641667 209 ntBASIC19.46■□□□□ 0.71
LRRTM4Q86VH4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRTM4Q86VH4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRTM4Q86VH4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.46■□□□□ 0.71
LRRTM4Q86VH4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.46■□□□□ 0.71
LRRTM4Q86VH4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRTM4Q86VH4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRTM4Q86VH4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRTM4Q86VH4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.46■□□□□ 0.71
LRRTM4Q86VH4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
LRRTM4Q86VH4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.45■□□□□ 0.7
LRRTM4Q86VH4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LRRTM4Q86VH4 TFP1-202ENST00000475455 1573 ntBASIC19.45■□□□□ 0.7
LRRTM4Q86VH4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LRRTM4Q86VH4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LRRTM4Q86VH4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms