Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BHLHA9Q7RTU4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BHLHA9Q7RTU4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.68■□□□□ 0.9
BHLHA9Q7RTU4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
BHLHA9Q7RTU4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BHLHA9Q7RTU4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
BHLHA9Q7RTU4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BHLHA9Q7RTU4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BHLHA9Q7RTU4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BHLHA9Q7RTU4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BHLHA9Q7RTU4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.67■□□□□ 0.9
BHLHA9Q7RTU4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
BHLHA9Q7RTU4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.67■□□□□ 0.9
BHLHA9Q7RTU4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.67■□□□□ 0.9
BHLHA9Q7RTU4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.67■□□□□ 0.9
BHLHA9Q7RTU4 PRKY-204ENST00000533551 1019 ntBASIC20.67■□□□□ 0.9
BHLHA9Q7RTU4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.67■□□□□ 0.9
BHLHA9Q7RTU4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.67■□□□□ 0.9
BHLHA9Q7RTU4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.67■□□□□ 0.9
BHLHA9Q7RTU4 AC110285.5-201ENST00000611501 352 ntBASIC20.67■□□□□ 0.9
BHLHA9Q7RTU4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BHLHA9Q7RTU4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BHLHA9Q7RTU4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BHLHA9Q7RTU4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.67■□□□□ 0.9
BHLHA9Q7RTU4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BHLHA9Q7RTU4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
BHLHA9Q7RTU4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.66■□□□□ 0.9
BHLHA9Q7RTU4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
BHLHA9Q7RTU4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BHLHA9Q7RTU4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
BHLHA9Q7RTU4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BHLHA9Q7RTU4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BHLHA9Q7RTU4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BHLHA9Q7RTU4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.66■□□□□ 0.9
BHLHA9Q7RTU4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.66■□□□□ 0.9
BHLHA9Q7RTU4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.66■□□□□ 0.9
BHLHA9Q7RTU4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.66■□□□□ 0.9
BHLHA9Q7RTU4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.66■□□□□ 0.9
BHLHA9Q7RTU4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BHLHA9Q7RTU4 NBPF21P-201ENST00000425093 1451 ntBASIC20.66■□□□□ 0.9
BHLHA9Q7RTU4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BHLHA9Q7RTU4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BHLHA9Q7RTU4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.66■□□□□ 0.9
BHLHA9Q7RTU4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.66■□□□□ 0.9
BHLHA9Q7RTU4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.66■□□□□ 0.9
BHLHA9Q7RTU4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
BHLHA9Q7RTU4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
BHLHA9Q7RTU4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BHLHA9Q7RTU4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
BHLHA9Q7RTU4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
BHLHA9Q7RTU4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.65■□□□□ 0.9
BHLHA9Q7RTU4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
BHLHA9Q7RTU4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
BHLHA9Q7RTU4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.65■□□□□ 0.9
BHLHA9Q7RTU4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
BHLHA9Q7RTU4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.65■□□□□ 0.9
BHLHA9Q7RTU4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BHLHA9Q7RTU4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BHLHA9Q7RTU4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
BHLHA9Q7RTU4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BHLHA9Q7RTU4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BHLHA9Q7RTU4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
BHLHA9Q7RTU4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
BHLHA9Q7RTU4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.65■□□□□ 0.9
BHLHA9Q7RTU4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.65■□□□□ 0.9
BHLHA9Q7RTU4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
BHLHA9Q7RTU4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
BHLHA9Q7RTU4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.9
BHLHA9Q7RTU4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.9
BHLHA9Q7RTU4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
BHLHA9Q7RTU4 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.64■□□□□ 0.9
BHLHA9Q7RTU4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
BHLHA9Q7RTU4 AC009237.14-201ENST00000609975 1594 ntBASIC20.64■□□□□ 0.9
BHLHA9Q7RTU4 AP001271.2-201ENST00000624018 1556 ntBASIC20.64■□□□□ 0.9
BHLHA9Q7RTU4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
BHLHA9Q7RTU4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.64■□□□□ 0.89
BHLHA9Q7RTU4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
BHLHA9Q7RTU4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
BHLHA9Q7RTU4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.64■□□□□ 0.89
BHLHA9Q7RTU4 UBE2SP1-201ENST00000450587 669 ntBASIC20.64■□□□□ 0.89
BHLHA9Q7RTU4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
BHLHA9Q7RTU4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.64■□□□□ 0.89
BHLHA9Q7RTU4 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.64■□□□□ 0.89
BHLHA9Q7RTU4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.64■□□□□ 0.89
BHLHA9Q7RTU4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.64■□□□□ 0.89
BHLHA9Q7RTU4 FAM197Y4-202ENST00000622692 608 ntBASIC20.64■□□□□ 0.89
BHLHA9Q7RTU4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.64■□□□□ 0.89
BHLHA9Q7RTU4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BHLHA9Q7RTU4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BHLHA9Q7RTU4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
BHLHA9Q7RTU4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.63■□□□□ 0.89
BHLHA9Q7RTU4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BHLHA9Q7RTU4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
BHLHA9Q7RTU4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BHLHA9Q7RTU4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BHLHA9Q7RTU4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
BHLHA9Q7RTU4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
BHLHA9Q7RTU4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
BHLHA9Q7RTU4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.63■□□□□ 0.89
BHLHA9Q7RTU4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms