Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RFWD3Q6PCD5 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFWD3Q6PCD5 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFWD3Q6PCD5 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFWD3Q6PCD5 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFWD3Q6PCD5 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.68■□□□□ 0.9
RFWD3Q6PCD5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.68■□□□□ 0.9
RFWD3Q6PCD5 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RFWD3Q6PCD5 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFWD3Q6PCD5 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFWD3Q6PCD5 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
RFWD3Q6PCD5 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFWD3Q6PCD5 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.68■□□□□ 0.9
RFWD3Q6PCD5 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFWD3Q6PCD5 AC066615.1-201ENST00000640911 628 ntBASIC20.68■□□□□ 0.9
RFWD3Q6PCD5 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFWD3Q6PCD5 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.68■□□□□ 0.9
RFWD3Q6PCD5 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFWD3Q6PCD5 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFWD3Q6PCD5 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFWD3Q6PCD5 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFWD3Q6PCD5 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFWD3Q6PCD5 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFWD3Q6PCD5 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.67■□□□□ 0.9
RFWD3Q6PCD5 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFWD3Q6PCD5 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
RFWD3Q6PCD5 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
RFWD3Q6PCD5 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.67■□□□□ 0.9
RFWD3Q6PCD5 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFWD3Q6PCD5 AC073314.1-201ENST00000568729 2216 ntBASIC20.67■□□□□ 0.9
RFWD3Q6PCD5 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFWD3Q6PCD5 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFWD3Q6PCD5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.67■□□□□ 0.9
RFWD3Q6PCD5 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFWD3Q6PCD5 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFWD3Q6PCD5 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RFWD3Q6PCD5 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFWD3Q6PCD5 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFWD3Q6PCD5 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.66■□□□□ 0.9
RFWD3Q6PCD5 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.66■□□□□ 0.9
RFWD3Q6PCD5 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.66■□□□□ 0.9
RFWD3Q6PCD5 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
RFWD3Q6PCD5 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.66■□□□□ 0.9
RFWD3Q6PCD5 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.66■□□□□ 0.9
RFWD3Q6PCD5 C1QBPP2-201ENST00000528754 825 ntBASIC20.66■□□□□ 0.9
RFWD3Q6PCD5 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.66■□□□□ 0.9
RFWD3Q6PCD5 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.66■□□□□ 0.9
RFWD3Q6PCD5 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.66■□□□□ 0.9
RFWD3Q6PCD5 RN7SL471P-201ENST00000580476 299 ntBASIC20.66■□□□□ 0.9
RFWD3Q6PCD5 AL031963.3-201ENST00000606441 850 ntBASIC20.66■□□□□ 0.9
RFWD3Q6PCD5 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFWD3Q6PCD5 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
RFWD3Q6PCD5 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFWD3Q6PCD5 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RFWD3Q6PCD5 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFWD3Q6PCD5 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFWD3Q6PCD5 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFWD3Q6PCD5 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
RFWD3Q6PCD5 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFWD3Q6PCD5 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFWD3Q6PCD5 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFWD3Q6PCD5 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.65■□□□□ 0.9
RFWD3Q6PCD5 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RFWD3Q6PCD5 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RFWD3Q6PCD5 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFWD3Q6PCD5 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.65■□□□□ 0.9
RFWD3Q6PCD5 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RFWD3Q6PCD5 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RFWD3Q6PCD5 KRT8P20-201ENST00000423953 1409 ntBASIC20.65■□□□□ 0.9
RFWD3Q6PCD5 KRT8P17-201ENST00000453110 1448 ntBASIC20.65■□□□□ 0.9
RFWD3Q6PCD5 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
RFWD3Q6PCD5 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RFWD3Q6PCD5 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RFWD3Q6PCD5 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RFWD3Q6PCD5 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RFWD3Q6PCD5 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.65■□□□□ 0.9
RFWD3Q6PCD5 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.65■□□□□ 0.9
RFWD3Q6PCD5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RFWD3Q6PCD5 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RFWD3Q6PCD5 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFWD3Q6PCD5 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.65■□□□□ 0.9
RFWD3Q6PCD5 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
RFWD3Q6PCD5 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFWD3Q6PCD5 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.65■□□□□ 0.9
RFWD3Q6PCD5 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.64■□□□□ 0.9
RFWD3Q6PCD5 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RFWD3Q6PCD5 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RFWD3Q6PCD5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RFWD3Q6PCD5 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFWD3Q6PCD5 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.64■□□□□ 0.89
RFWD3Q6PCD5 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RFWD3Q6PCD5 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RFWD3Q6PCD5 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.64■□□□□ 0.89
RFWD3Q6PCD5 HLA-G-202ENST00000376815 851 ntBASIC20.64■□□□□ 0.89
RFWD3Q6PCD5 HLA-G-203ENST00000376818 1127 ntBASIC20.64■□□□□ 0.89
RFWD3Q6PCD5 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RFWD3Q6PCD5 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.64■□□□□ 0.89
RFWD3Q6PCD5 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.64■□□□□ 0.89
RFWD3Q6PCD5 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.64■□□□□ 0.89
RFWD3Q6PCD5 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms