Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
H3F3AP84243 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.76■□□□□ 0.43
H3F3AP84243 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
H3F3AP84243 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
H3F3AP84243 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.76■□□□□ 0.43
H3F3AP84243 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
H3F3AP84243 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.76■□□□□ 0.43
H3F3AP84243 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.76■□□□□ 0.43
H3F3AP84243 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.76■□□□□ 0.43
H3F3AP84243 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
H3F3AP84243 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H3F3AP84243 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H3F3AP84243 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H3F3AP84243 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.76■□□□□ 0.43
H3F3AP84243 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
H3F3AP84243 AC026366.1-201ENST00000488803 879 ntBASIC17.76■□□□□ 0.43
H3F3AP84243 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.76■□□□□ 0.43
H3F3AP84243 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
H3F3AP84243 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.76■□□□□ 0.43
H3F3AP84243 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H3F3AP84243 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.76■□□□□ 0.43
H3F3AP84243 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H3F3AP84243 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H3F3AP84243 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H3F3AP84243 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H3F3AP84243 PHGDH-210ENST00000641115 1638 ntBASIC17.76■□□□□ 0.43
H3F3AP84243 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.75■□□□□ 0.43
H3F3AP84243 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H3F3AP84243 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
H3F3AP84243 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
H3F3AP84243 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H3F3AP84243 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.75■□□□□ 0.43
H3F3AP84243 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
H3F3AP84243 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
H3F3AP84243 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.75■□□□□ 0.43
H3F3AP84243 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.75■□□□□ 0.43
H3F3AP84243 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H3F3AP84243 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
H3F3AP84243 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
H3F3AP84243 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
H3F3AP84243 AP003097.1-201ENST00000530657 1135 ntBASIC17.75■□□□□ 0.43
H3F3AP84243 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.75■□□□□ 0.43
H3F3AP84243 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.75■□□□□ 0.43
H3F3AP84243 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.75■□□□□ 0.43
H3F3AP84243 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.75■□□□□ 0.43
H3F3AP84243 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.75■□□□□ 0.43
H3F3AP84243 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.75■□□□□ 0.43
H3F3AP84243 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.75■□□□□ 0.43
H3F3AP84243 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.75■□□□□ 0.43
H3F3AP84243 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
H3F3AP84243 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
H3F3AP84243 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
H3F3AP84243 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.74■□□□□ 0.43
H3F3AP84243 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H3F3AP84243 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
H3F3AP84243 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
H3F3AP84243 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.74■□□□□ 0.43
H3F3AP84243 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H3F3AP84243 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H3F3AP84243 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
H3F3AP84243 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H3F3AP84243 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
H3F3AP84243 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.74■□□□□ 0.43
H3F3AP84243 POM121L13P-201ENST00000422362 380 ntBASIC17.74■□□□□ 0.43
H3F3AP84243 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.74■□□□□ 0.43
H3F3AP84243 RPS2P52-201ENST00000469610 820 ntBASIC17.74■□□□□ 0.43
H3F3AP84243 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
H3F3AP84243 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
H3F3AP84243 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H3F3AP84243 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
H3F3AP84243 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H3F3AP84243 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H3F3AP84243 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.74■□□□□ 0.43
H3F3AP84243 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.74■□□□□ 0.43
H3F3AP84243 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
H3F3AP84243 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
H3F3AP84243 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H3F3AP84243 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H3F3AP84243 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.73■□□□□ 0.43
H3F3AP84243 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
H3F3AP84243 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H3F3AP84243 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H3F3AP84243 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
H3F3AP84243 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
H3F3AP84243 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H3F3AP84243 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
H3F3AP84243 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
H3F3AP84243 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H3F3AP84243 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
H3F3AP84243 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.73■□□□□ 0.43
H3F3AP84243 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H3F3AP84243 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H3F3AP84243 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
H3F3AP84243 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.73■□□□□ 0.43
H3F3AP84243 AC116351.2-201ENST00000606540 1585 ntBASIC17.73■□□□□ 0.43
H3F3AP84243 AC009237.14-201ENST00000609975 1594 ntBASIC17.73■□□□□ 0.43
H3F3AP84243 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H3F3AP84243 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.73■□□□□ 0.43
H3F3AP84243 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
H3F3AP84243 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms