Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.98■□□□□ 0.79
PRAMEP78395 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEP78395 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PRAMEP78395 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRAMEP78395 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PRAMEP78395 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PRAMEP78395 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PRAMEP78395 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.97■□□□□ 0.79
PRAMEP78395 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PRAMEP78395 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRAMEP78395 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRAMEP78395 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRAMEP78395 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.97■□□□□ 0.79
PRAMEP78395 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.97■□□□□ 0.79
PRAMEP78395 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRAMEP78395 GPX1P1-201ENST00000388829 606 ntBASIC19.97■□□□□ 0.79
PRAMEP78395 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.97■□□□□ 0.79
PRAMEP78395 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PRAMEP78395 AC023632.3-201ENST00000521633 145 ntBASIC19.97■□□□□ 0.79
PRAMEP78395 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.97■□□□□ 0.79
PRAMEP78395 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRAMEP78395 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PRAMEP78395 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
PRAMEP78395 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRAMEP78395 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.97■□□□□ 0.79
PRAMEP78395 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.97■□□□□ 0.79
PRAMEP78395 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.97■□□□□ 0.79
PRAMEP78395 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PRAMEP78395 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.97■□□□□ 0.79
PRAMEP78395 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PRAMEP78395 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRAMEP78395 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PRAMEP78395 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PRAMEP78395 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PRAMEP78395 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
PRAMEP78395 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PRAMEP78395 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PRAMEP78395 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRAMEP78395 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
PRAMEP78395 NCF1B-203ENST00000435988 1254 ntBASIC19.96■□□□□ 0.79
PRAMEP78395 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PRAMEP78395 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PRAMEP78395 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PRAMEP78395 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRAMEP78395 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PRAMEP78395 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRAMEP78395 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PRAMEP78395 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRAMEP78395 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.96■□□□□ 0.79
PRAMEP78395 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRAMEP78395 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRAMEP78395 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRAMEP78395 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PRAMEP78395 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRAMEP78395 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRAMEP78395 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRAMEP78395 TMEM179-206ENST00000616017 1645 ntBASIC19.95■□□□□ 0.78
PRAMEP78395 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRAMEP78395 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRAMEP78395 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PRAMEP78395 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.95■□□□□ 0.78
PRAMEP78395 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PRAMEP78395 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PRAMEP78395 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRAMEP78395 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PRAMEP78395 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.95■□□□□ 0.78
PRAMEP78395 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.95■□□□□ 0.78
PRAMEP78395 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.95■□□□□ 0.78
PRAMEP78395 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.95■□□□□ 0.78
PRAMEP78395 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRAMEP78395 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRAMEP78395 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.95■□□□□ 0.78
PRAMEP78395 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PRAMEP78395 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRAMEP78395 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PRAMEP78395 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PRAMEP78395 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRAMEP78395 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRAMEP78395 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRAMEP78395 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRAMEP78395 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.94■□□□□ 0.78
PRAMEP78395 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.94■□□□□ 0.78
PRAMEP78395 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.94■□□□□ 0.78
PRAMEP78395 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRAMEP78395 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRAMEP78395 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRAMEP78395 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRAMEP78395 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRAMEP78395 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PRAMEP78395 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.94■□□□□ 0.78
PRAMEP78395 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.94■□□□□ 0.78
PRAMEP78395 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.94■□□□□ 0.78
PRAMEP78395 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.94■□□□□ 0.78
PRAMEP78395 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRAMEP78395 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.94■□□□□ 0.78
PRAMEP78395 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRAMEP78395 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PRAMEP78395 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.94■□□□□ 0.78
PRAMEP78395 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRAMEP78395 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms