Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
RPL39P62891 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RPL39P62891 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
RPL39P62891 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RPL39P62891 AL032819.2-201ENST00000624543 2162 ntBASIC14.02□□□□□ -0.17
RPL39P62891 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RPL39P62891 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC14.02□□□□□ -0.17
RPL39P62891 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPL39P62891 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC14.01□□□□□ -0.17
RPL39P62891 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPL39P62891 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPL39P62891 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RPL39P62891 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPL39P62891 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.01□□□□□ -0.17
RPL39P62891 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPL39P62891 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RPL39P62891 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPL39P62891 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPL39P62891 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RPL39P62891 AC079140.4-201ENST00000507448 529 ntBASIC14.01□□□□□ -0.17
RPL39P62891 AC138907.5-202ENST00000569484 235 ntBASIC14.01□□□□□ -0.17
RPL39P62891 TPRG1LP1-201ENST00000598702 760 ntBASIC14.01□□□□□ -0.17
RPL39P62891 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPL39P62891 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPL39P62891 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPL39P62891 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RPL39P62891 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPL39P62891 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC14.01□□□□□ -0.17
RPL39P62891 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC14.01□□□□□ -0.17
RPL39P62891 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC14.01□□□□□ -0.17
RPL39P62891 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPL39P62891 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RPL39P62891 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RPL39P62891 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RPL39P62891 TP73-202ENST00000354437 2140 ntTSL 5 BASIC14□□□□□ -0.17
RPL39P62891 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14□□□□□ -0.17
RPL39P62891 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC14□□□□□ -0.17
RPL39P62891 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RPL39P62891 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RPL39P62891 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RPL39P62891 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RPL39P62891 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RPL39P62891 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RPL39P62891 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC14□□□□□ -0.17
RPL39P62891 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC14□□□□□ -0.17
RPL39P62891 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC14□□□□□ -0.17
RPL39P62891 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC14□□□□□ -0.17
RPL39P62891 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC14□□□□□ -0.17
RPL39P62891 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC14□□□□□ -0.17
RPL39P62891 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC14□□□□□ -0.17
RPL39P62891 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
RPL39P62891 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC14□□□□□ -0.17
RPL39P62891 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RPL39P62891 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
RPL39P62891 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
RPL39P62891 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC14□□□□□ -0.17
RPL39P62891 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14□□□□□ -0.17
RPL39P62891 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RPL39P62891 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC14□□□□□ -0.17
RPL39P62891 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RPL39P62891 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC14□□□□□ -0.17
RPL39P62891 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC14□□□□□ -0.17
RPL39P62891 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC14□□□□□ -0.17
RPL39P62891 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
RPL39P62891 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
RPL39P62891 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
RPL39P62891 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPL39P62891 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RPL39P62891 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPL39P62891 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPL39P62891 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC13.99□□□□□ -0.17
RPL39P62891 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPL39P62891 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC13.99□□□□□ -0.17
RPL39P62891 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
RPL39P62891 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
RPL39P62891 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPL39P62891 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC13.99□□□□□ -0.17
RPL39P62891 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPL39P62891 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC13.99□□□□□ -0.17
RPL39P62891 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC13.99□□□□□ -0.17
RPL39P62891 AC012414.1-201ENST00000556676 535 ntBASIC13.99□□□□□ -0.17
RPL39P62891 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC13.99□□□□□ -0.17
RPL39P62891 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC13.99□□□□□ -0.17
RPL39P62891 MAG-206ENST00000597035 542 ntTSL 4 BASIC13.99□□□□□ -0.17
RPL39P62891 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC13.99□□□□□ -0.17
RPL39P62891 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPL39P62891 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC13.99□□□□□ -0.17
RPL39P62891 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPL39P62891 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPL39P62891 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPL39P62891 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPL39P62891 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RPL39P62891 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPL39P62891 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPL39P62891 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC13.99□□□□□ -0.17
RPL39P62891 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC13.99□□□□□ -0.17
RPL39P62891 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC13.99□□□□□ -0.17
RPL39P62891 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RPL39P62891 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RPL39P62891 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms