Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2D3P61077 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2D3P61077 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2D3P61077 STX6-204ENST00000542060 4809 ntTSL 2 BASIC14.1□□□□□ -0.15
UBE2D3P61077 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2D3P61077 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D3P61077 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
UBE2D3P61077 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
UBE2D3P61077 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D3P61077 AC020916.1-201ENST00000587762 1774 ntBASIC14.09□□□□□ -0.15
UBE2D3P61077 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D3P61077 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D3P61077 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC14.09□□□□□ -0.15
UBE2D3P61077 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC14.09□□□□□ -0.15
UBE2D3P61077 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D3P61077 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC14.09□□□□□ -0.15
UBE2D3P61077 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
UBE2D3P61077 AL691432.2-201ENST00000607222 2038 ntBASIC14.09□□□□□ -0.15
UBE2D3P61077 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D3P61077 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D3P61077 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D3P61077 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D3P61077 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D3P61077 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC14.09□□□□□ -0.15
UBE2D3P61077 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC14.09□□□□□ -0.15
UBE2D3P61077 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC14.09□□□□□ -0.15
UBE2D3P61077 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D3P61077 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D3P61077 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC14.09□□□□□ -0.15
UBE2D3P61077 AC016405.3-201ENST00000607710 860 ntBASIC14.09□□□□□ -0.15
UBE2D3P61077 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D3P61077 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D3P61077 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.09□□□□□ -0.15
UBE2D3P61077 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D3P61077 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D3P61077 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D3P61077 AL158211.5-201ENST00000623583 2518 ntBASIC14.09□□□□□ -0.15
UBE2D3P61077 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
UBE2D3P61077 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D3P61077 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
UBE2D3P61077 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC14.09□□□□□ -0.15
UBE2D3P61077 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D3P61077 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D3P61077 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D3P61077 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2D3P61077 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC14.09□□□□□ -0.15
UBE2D3P61077 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
UBE2D3P61077 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
UBE2D3P61077 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
UBE2D3P61077 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
UBE2D3P61077 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
UBE2D3P61077 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2D3P61077 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2D3P61077 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2D3P61077 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2D3P61077 STK25-205ENST00000405883 1904 ntTSL 2 BASIC14.08□□□□□ -0.16
UBE2D3P61077 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
UBE2D3P61077 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC14.08□□□□□ -0.16
UBE2D3P61077 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC14.08□□□□□ -0.16
UBE2D3P61077 HSCB-202ENST00000398941 955 ntTSL 2 BASIC14.08□□□□□ -0.16
UBE2D3P61077 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC14.08□□□□□ -0.16
UBE2D3P61077 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC14.08□□□□□ -0.16
UBE2D3P61077 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC14.08□□□□□ -0.16
UBE2D3P61077 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC14.08□□□□□ -0.16
UBE2D3P61077 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC14.08□□□□□ -0.16
UBE2D3P61077 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC14.08□□□□□ -0.16
UBE2D3P61077 AC087623.3-201ENST00000607047 1098 ntBASIC14.08□□□□□ -0.16
UBE2D3P61077 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
UBE2D3P61077 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2D3P61077 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2D3P61077 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
UBE2D3P61077 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC14.08□□□□□ -0.16
UBE2D3P61077 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2D3P61077 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2D3P61077 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2D3P61077 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2D3P61077 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
UBE2D3P61077 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2D3P61077 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC14.08□□□□□ -0.16
UBE2D3P61077 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2D3P61077 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
UBE2D3P61077 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
UBE2D3P61077 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2D3P61077 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2D3P61077 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC14.08□□□□□ -0.16
UBE2D3P61077 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2D3P61077 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC14.08□□□□□ -0.16
UBE2D3P61077 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
UBE2D3P61077 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2D3P61077 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2D3P61077 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2D3P61077 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC14.07□□□□□ -0.16
UBE2D3P61077 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2D3P61077 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2D3P61077 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC14.07□□□□□ -0.16
UBE2D3P61077 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC14.07□□□□□ -0.16
UBE2D3P61077 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2D3P61077 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2D3P61077 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2D3P61077 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms