Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.78■□□□□ 0.92
EPHB3P54753 TFP1-202ENST00000475455 1573 ntBASIC20.78■□□□□ 0.92
EPHB3P54753 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
EPHB3P54753 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EPHB3P54753 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EPHB3P54753 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EPHB3P54753 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.78■□□□□ 0.92
EPHB3P54753 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
EPHB3P54753 FAM210CP-201ENST00000445714 574 ntBASIC20.78■□□□□ 0.92
EPHB3P54753 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.78■□□□□ 0.92
EPHB3P54753 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.78■□□□□ 0.92
EPHB3P54753 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.78■□□□□ 0.92
EPHB3P54753 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EPHB3P54753 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EPHB3P54753 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EPHB3P54753 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
EPHB3P54753 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EPHB3P54753 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.78■□□□□ 0.92
EPHB3P54753 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EPHB3P54753 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
EPHB3P54753 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
EPHB3P54753 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.78■□□□□ 0.92
EPHB3P54753 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
EPHB3P54753 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
EPHB3P54753 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.78■□□□□ 0.92
EPHB3P54753 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
EPHB3P54753 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.77■□□□□ 0.92
EPHB3P54753 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
EPHB3P54753 AC018553.1-201ENST00000616682 1458 ntBASIC20.77■□□□□ 0.92
EPHB3P54753 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
EPHB3P54753 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.77■□□□□ 0.92
EPHB3P54753 MMP23A-201ENST00000234610 1017 ntBASIC20.77■□□□□ 0.92
EPHB3P54753 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
EPHB3P54753 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.77■□□□□ 0.92
EPHB3P54753 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
EPHB3P54753 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.77■□□□□ 0.92
EPHB3P54753 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.77■□□□□ 0.92
EPHB3P54753 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
EPHB3P54753 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EPHB3P54753 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EPHB3P54753 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EPHB3P54753 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EPHB3P54753 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
EPHB3P54753 KRT16P1-201ENST00000399124 1418 ntBASIC20.77■□□□□ 0.91
EPHB3P54753 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
EPHB3P54753 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
EPHB3P54753 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.76■□□□□ 0.91
EPHB3P54753 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
EPHB3P54753 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.76■□□□□ 0.91
EPHB3P54753 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EPHB3P54753 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EPHB3P54753 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
EPHB3P54753 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EPHB3P54753 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
EPHB3P54753 YBX1P10-201ENST00000444752 975 ntBASIC20.76■□□□□ 0.91
EPHB3P54753 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EPHB3P54753 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
EPHB3P54753 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.76■□□□□ 0.91
EPHB3P54753 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.76■□□□□ 0.91
EPHB3P54753 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.76■□□□□ 0.91
EPHB3P54753 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.76■□□□□ 0.91
EPHB3P54753 REXO1L10P-201ENST00000615707 1290 ntBASIC20.76■□□□□ 0.91
EPHB3P54753 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.76■□□□□ 0.91
EPHB3P54753 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
EPHB3P54753 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.75■□□□□ 0.91
EPHB3P54753 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
EPHB3P54753 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.75■□□□□ 0.91
EPHB3P54753 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EPHB3P54753 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
EPHB3P54753 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EPHB3P54753 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
EPHB3P54753 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.75■□□□□ 0.91
EPHB3P54753 UNC93B2-201ENST00000285383 730 ntBASIC20.75■□□□□ 0.91
EPHB3P54753 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EPHB3P54753 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
EPHB3P54753 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EPHB3P54753 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
EPHB3P54753 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.75■□□□□ 0.91
EPHB3P54753 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.75■□□□□ 0.91
EPHB3P54753 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.75■□□□□ 0.91
EPHB3P54753 AC097493.4-201ENST00000641197 219 ntBASIC20.75■□□□□ 0.91
EPHB3P54753 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EPHB3P54753 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EPHB3P54753 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EPHB3P54753 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EPHB3P54753 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
EPHB3P54753 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.75■□□□□ 0.91
EPHB3P54753 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
EPHB3P54753 PHGDH-210ENST00000641115 1638 ntBASIC20.75■□□□□ 0.91
EPHB3P54753 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EPHB3P54753 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.74■□□□□ 0.91
EPHB3P54753 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EPHB3P54753 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EPHB3P54753 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EPHB3P54753 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EPHB3P54753 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.74■□□□□ 0.91
EPHB3P54753 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.74■□□□□ 0.91
EPHB3P54753 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.74■□□□□ 0.91
EPHB3P54753 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
EPHB3P54753 RBM17P1-201ENST00000453646 1190 ntBASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms