Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.29■□□□□ 0.68
PDX1P52945 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.29■□□□□ 0.68
PDX1P52945 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDX1P52945 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PDX1P52945 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PDX1P52945 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.29■□□□□ 0.68
PDX1P52945 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDX1P52945 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PDX1P52945 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDX1P52945 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.29■□□□□ 0.68
PDX1P52945 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.29■□□□□ 0.68
PDX1P52945 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.29■□□□□ 0.68
PDX1P52945 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.29■□□□□ 0.68
PDX1P52945 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
PDX1P52945 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDX1P52945 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.29■□□□□ 0.68
PDX1P52945 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.29■□□□□ 0.68
PDX1P52945 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.29■□□□□ 0.68
PDX1P52945 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.29■□□□□ 0.68
PDX1P52945 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PDX1P52945 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDX1P52945 AC121338.2-201ENST00000622535 1744 ntBASIC19.28■□□□□ 0.68
PDX1P52945 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDX1P52945 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDX1P52945 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PDX1P52945 AC006128.1-201ENST00000624704 1661 ntBASIC19.28■□□□□ 0.68
PDX1P52945 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PDX1P52945 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDX1P52945 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDX1P52945 KRT16P5-201ENST00000455284 522 ntBASIC19.28■□□□□ 0.68
PDX1P52945 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.28■□□□□ 0.68
PDX1P52945 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PDX1P52945 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.28■□□□□ 0.68
PDX1P52945 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDX1P52945 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDX1P52945 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDX1P52945 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDX1P52945 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.28■□□□□ 0.68
PDX1P52945 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PDX1P52945 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDX1P52945 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.28■□□□□ 0.68
PDX1P52945 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PDX1P52945 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDX1P52945 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDX1P52945 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PDX1P52945 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PDX1P52945 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
PDX1P52945 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDX1P52945 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PDX1P52945 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PDX1P52945 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PDX1P52945 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDX1P52945 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.27■□□□□ 0.68
PDX1P52945 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.27■□□□□ 0.68
PDX1P52945 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.27■□□□□ 0.68
PDX1P52945 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDX1P52945 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.27■□□□□ 0.68
PDX1P52945 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.27■□□□□ 0.68
PDX1P52945 MIR2861-201ENST00000636310 90 ntBASIC19.27■□□□□ 0.68
PDX1P52945 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDX1P52945 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDX1P52945 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDX1P52945 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PDX1P52945 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
PDX1P52945 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.27■□□□□ 0.67
PDX1P52945 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.27■□□□□ 0.67
PDX1P52945 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.27■□□□□ 0.67
PDX1P52945 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.27■□□□□ 0.67
PDX1P52945 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDX1P52945 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PDX1P52945 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDX1P52945 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDX1P52945 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDX1P52945 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PDX1P52945 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDX1P52945 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.26■□□□□ 0.67
PDX1P52945 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.26■□□□□ 0.67
PDX1P52945 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDX1P52945 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PDX1P52945 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.26■□□□□ 0.67
PDX1P52945 CD177P1-201ENST00000606252 935 ntBASIC19.26■□□□□ 0.67
PDX1P52945 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDX1P52945 NBPF21P-201ENST00000425093 1451 ntBASIC19.26■□□□□ 0.67
PDX1P52945 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PDX1P52945 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDX1P52945 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
PDX1P52945 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDX1P52945 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDX1P52945 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDX1P52945 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDX1P52945 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDX1P52945 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDX1P52945 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PDX1P52945 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDX1P52945 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDX1P52945 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.25■□□□□ 0.67
PDX1P52945 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDX1P52945 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDX1P52945 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.25■□□□□ 0.67
PDX1P52945 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms