Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDR1P51861 FP700111.2-201ENST00000619190 1892 ntBASIC21.62■■□□□ 1.05
CDR1P51861 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDR1P51861 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.62■■□□□ 1.05
CDR1P51861 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.62■■□□□ 1.05
CDR1P51861 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDR1P51861 AC128676.1-201ENST00000454392 318 ntBASIC21.62■■□□□ 1.05
CDR1P51861 AC008403.3-201ENST00000598924 454 ntBASIC21.62■■□□□ 1.05
CDR1P51861 ITM2C-210ENST00000620962 501 ntBASIC21.62■■□□□ 1.05
CDR1P51861 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDR1P51861 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CDR1P51861 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDR1P51861 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDR1P51861 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDR1P51861 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDR1P51861 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDR1P51861 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDR1P51861 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDR1P51861 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDR1P51861 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.61■■□□□ 1.05
CDR1P51861 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.61■■□□□ 1.05
CDR1P51861 PNMA6B-201ENST00000538162 1200 ntBASIC21.61■■□□□ 1.05
CDR1P51861 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.61■■□□□ 1.05
CDR1P51861 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.61■■□□□ 1.05
CDR1P51861 C2orf69P4-201ENST00000565394 541 ntBASIC21.61■■□□□ 1.05
CDR1P51861 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.61■■□□□ 1.05
CDR1P51861 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDR1P51861 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDR1P51861 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.61■■□□□ 1.05
CDR1P51861 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDR1P51861 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDR1P51861 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CDR1P51861 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDR1P51861 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
CDR1P51861 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CDR1P51861 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDR1P51861 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDR1P51861 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.6■■□□□ 1.05
CDR1P51861 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDR1P51861 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDR1P51861 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDR1P51861 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDR1P51861 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDR1P51861 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.6■■□□□ 1.05
CDR1P51861 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.6■■□□□ 1.05
CDR1P51861 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.6■■□□□ 1.05
CDR1P51861 AP003097.1-201ENST00000530657 1135 ntBASIC21.6■■□□□ 1.05
CDR1P51861 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDR1P51861 SOX15-203ENST00000570788 1093 ntBASIC21.6■■□□□ 1.05
CDR1P51861 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.6■■□□□ 1.05
CDR1P51861 AC006557.6-201ENST00000623071 864 ntBASIC21.6■■□□□ 1.05
CDR1P51861 AC073648.6-201ENST00000641589 218 ntBASIC21.6■■□□□ 1.05
CDR1P51861 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.6■■□□□ 1.05
CDR1P51861 AC027702.1-201ENST00000563810 1770 ntBASIC21.6■■□□□ 1.05
CDR1P51861 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDR1P51861 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.6■■□□□ 1.05
CDR1P51861 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDR1P51861 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDR1P51861 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDR1P51861 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.59■■□□□ 1.05
CDR1P51861 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDR1P51861 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CDR1P51861 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDR1P51861 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDR1P51861 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CDR1P51861 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.59■■□□□ 1.05
CDR1P51861 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CDR1P51861 AL158047.1-201ENST00000445918 881 ntBASIC21.59■■□□□ 1.05
CDR1P51861 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.59■■□□□ 1.05
CDR1P51861 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.59■■□□□ 1.05
CDR1P51861 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDR1P51861 AC060766.5-201ENST00000590539 871 ntBASIC21.59■■□□□ 1.05
CDR1P51861 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDR1P51861 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDR1P51861 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.59■■□□□ 1.05
CDR1P51861 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC21.59■■□□□ 1.05
CDR1P51861 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDR1P51861 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDR1P51861 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDR1P51861 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDR1P51861 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDR1P51861 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CDR1P51861 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
CDR1P51861 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.58■■□□□ 1.05
CDR1P51861 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
CDR1P51861 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.58■■□□□ 1.05
CDR1P51861 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDR1P51861 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.58■■□□□ 1.05
CDR1P51861 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDR1P51861 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CDR1P51861 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDR1P51861 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDR1P51861 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.58■■□□□ 1.05
CDR1P51861 AC026366.1-201ENST00000488803 879 ntBASIC21.58■■□□□ 1.05
CDR1P51861 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.58■■□□□ 1.05
CDR1P51861 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.58■■□□□ 1.05
CDR1P51861 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.58■■□□□ 1.05
CDR1P51861 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
CDR1P51861 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CDR1P51861 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms