Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC22.47■■□□□ 1.19
USP11P51784 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
USP11P51784 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC22.47■■□□□ 1.19
USP11P51784 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
USP11P51784 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
USP11P51784 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
USP11P51784 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
USP11P51784 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
USP11P51784 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
USP11P51784 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC22.47■■□□□ 1.19
USP11P51784 AC098590.1-201ENST00000468126 897 ntBASIC22.47■■□□□ 1.19
USP11P51784 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC22.47■■□□□ 1.19
USP11P51784 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
USP11P51784 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC22.47■■□□□ 1.19
USP11P51784 LY6E-205ENST00000519611 635 ntTSL 3 BASIC22.47■■□□□ 1.19
USP11P51784 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC22.47■■□□□ 1.19
USP11P51784 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
USP11P51784 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC22.47■■□□□ 1.19
USP11P51784 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC22.47■■□□□ 1.19
USP11P51784 AL023875.1-201ENST00000640777 796 ntBASIC22.47■■□□□ 1.19
USP11P51784 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
USP11P51784 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.47■■□□□ 1.19
USP11P51784 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
USP11P51784 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC22.47■■□□□ 1.19
USP11P51784 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
USP11P51784 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
USP11P51784 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.46■■□□□ 1.19
USP11P51784 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
USP11P51784 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
USP11P51784 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
USP11P51784 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
USP11P51784 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
USP11P51784 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
USP11P51784 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
USP11P51784 SERF2-207ENST00000409614 582 ntTSL 2 BASIC22.46■■□□□ 1.19
USP11P51784 GCSHP5-201ENST00000443090 522 ntBASIC22.46■■□□□ 1.19
USP11P51784 C1QBPP2-201ENST00000528754 825 ntBASIC22.46■■□□□ 1.19
USP11P51784 RNF121-214ENST00000533380 870 ntTSL 3 BASIC22.46■■□□□ 1.19
USP11P51784 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
USP11P51784 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.46■■□□□ 1.19
USP11P51784 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC22.46■■□□□ 1.19
USP11P51784 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC22.46■■□□□ 1.19
USP11P51784 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC22.46■■□□□ 1.19
USP11P51784 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
USP11P51784 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC22.46■■□□□ 1.19
USP11P51784 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
USP11P51784 Six3os1_6.1-201ENST00000620790 196 ntBASIC22.46■■□□□ 1.19
USP11P51784 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
USP11P51784 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC22.46■■□□□ 1.19
USP11P51784 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
USP11P51784 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
USP11P51784 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC22.46■■□□□ 1.19
USP11P51784 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
USP11P51784 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC22.46■■□□□ 1.19
USP11P51784 AC009237.14-201ENST00000609975 1594 ntBASIC22.46■■□□□ 1.19
USP11P51784 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
USP11P51784 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.19
USP11P51784 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC22.45■■□□□ 1.18
USP11P51784 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
USP11P51784 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
USP11P51784 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
USP11P51784 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
USP11P51784 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
USP11P51784 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
USP11P51784 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
USP11P51784 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC22.45■■□□□ 1.18
USP11P51784 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
USP11P51784 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.45■■□□□ 1.18
USP11P51784 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC22.45■■□□□ 1.18
USP11P51784 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.45■■□□□ 1.18
USP11P51784 AC142381.4-202ENST00000563973 229 ntBASIC22.45■■□□□ 1.18
USP11P51784 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC22.45■■□□□ 1.18
USP11P51784 AC124016.1-201ENST00000609552 612 ntBASIC22.45■■□□□ 1.18
USP11P51784 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
USP11P51784 AL359736.2-201ENST00000621992 437 ntBASIC22.45■■□□□ 1.18
USP11P51784 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC22.45■■□□□ 1.18
USP11P51784 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
USP11P51784 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
USP11P51784 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC22.45■■□□□ 1.18
USP11P51784 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
USP11P51784 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC22.45■■□□□ 1.18
USP11P51784 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.45■■□□□ 1.18
USP11P51784 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC22.45■■□□□ 1.18
USP11P51784 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
USP11P51784 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
USP11P51784 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
USP11P51784 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
USP11P51784 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
USP11P51784 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
USP11P51784 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
USP11P51784 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
USP11P51784 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
USP11P51784 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
USP11P51784 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
USP11P51784 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC22.44■■□□□ 1.18
USP11P51784 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.44■■□□□ 1.18
USP11P51784 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
USP11P51784 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
USP11P51784 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
USP11P51784 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms