Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MTHFRP42898 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MTHFRP42898 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.81■□□□□ 0.92
MTHFRP42898 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.81■□□□□ 0.92
MTHFRP42898 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MTHFRP42898 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.81■□□□□ 0.92
MTHFRP42898 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.81■□□□□ 0.92
MTHFRP42898 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.81■□□□□ 0.92
MTHFRP42898 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
MTHFRP42898 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MTHFRP42898 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
MTHFRP42898 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.81■□□□□ 0.92
MTHFRP42898 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MTHFRP42898 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MTHFRP42898 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
MTHFRP42898 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.8■□□□□ 0.92
MTHFRP42898 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MTHFRP42898 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
MTHFRP42898 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
MTHFRP42898 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MTHFRP42898 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MTHFRP42898 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.8■□□□□ 0.92
MTHFRP42898 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
MTHFRP42898 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.8■□□□□ 0.92
MTHFRP42898 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.8■□□□□ 0.92
MTHFRP42898 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.8■□□□□ 0.92
MTHFRP42898 EGLN1P1-201ENST00000531623 762 ntBASIC20.8■□□□□ 0.92
MTHFRP42898 AC010203.1-204ENST00000548782 407 ntBASIC20.8■□□□□ 0.92
MTHFRP42898 AC026271.3-201ENST00000571884 352 ntBASIC20.8■□□□□ 0.92
MTHFRP42898 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.8■□□□□ 0.92
MTHFRP42898 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MTHFRP42898 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MTHFRP42898 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MTHFRP42898 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MTHFRP42898 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.8■□□□□ 0.92
MTHFRP42898 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MTHFRP42898 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MTHFRP42898 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.8■□□□□ 0.92
MTHFRP42898 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.8■□□□□ 0.92
MTHFRP42898 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MTHFRP42898 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MTHFRP42898 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.8■□□□□ 0.92
MTHFRP42898 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.8■□□□□ 0.92
MTHFRP42898 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.8■□□□□ 0.92
MTHFRP42898 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.79■□□□□ 0.92
MTHFRP42898 KRT8P20-201ENST00000423953 1409 ntBASIC20.79■□□□□ 0.92
MTHFRP42898 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.79■□□□□ 0.92
MTHFRP42898 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.79■□□□□ 0.92
MTHFRP42898 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MTHFRP42898 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.79■□□□□ 0.92
MTHFRP42898 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MTHFRP42898 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MTHFRP42898 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MTHFRP42898 WWOX-216ENST00000569818 525 ntBASIC20.79■□□□□ 0.92
MTHFRP42898 AP005242.2-201ENST00000580065 1175 ntBASIC20.79■□□□□ 0.92
MTHFRP42898 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.79■□□□□ 0.92
MTHFRP42898 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MTHFRP42898 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MTHFRP42898 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
MTHFRP42898 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MTHFRP42898 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.79■□□□□ 0.92
MTHFRP42898 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.79■□□□□ 0.92
MTHFRP42898 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MTHFRP42898 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.78■□□□□ 0.92
MTHFRP42898 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
MTHFRP42898 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
MTHFRP42898 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
MTHFRP42898 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
MTHFRP42898 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.78■□□□□ 0.92
MTHFRP42898 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MTHFRP42898 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.78■□□□□ 0.92
MTHFRP42898 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MTHFRP42898 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MTHFRP42898 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.78■□□□□ 0.92
MTHFRP42898 DGCR10-201ENST00000609839 495 ntBASIC20.78■□□□□ 0.92
MTHFRP42898 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.78■□□□□ 0.92
MTHFRP42898 FBXW4P1-201ENST00000426721 2239 ntBASIC20.78■□□□□ 0.92
MTHFRP42898 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
MTHFRP42898 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MTHFRP42898 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.77■□□□□ 0.92
MTHFRP42898 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
MTHFRP42898 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MTHFRP42898 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MTHFRP42898 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.77■□□□□ 0.92
MTHFRP42898 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MTHFRP42898 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
MTHFRP42898 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.77■□□□□ 0.92
MTHFRP42898 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.77■□□□□ 0.92
MTHFRP42898 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.77■□□□□ 0.92
MTHFRP42898 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.77■□□□□ 0.92
MTHFRP42898 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.77■□□□□ 0.92
MTHFRP42898 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
MTHFRP42898 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
MTHFRP42898 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
MTHFRP42898 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.77■□□□□ 0.91
MTHFRP42898 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
MTHFRP42898 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.77■□□□□ 0.91
MTHFRP42898 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MTHFRP42898 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
MTHFRP42898 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms