Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HTTP42858 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC22.48■■□□□ 1.19
HTTP42858 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HTTP42858 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
HTTP42858 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.48■■□□□ 1.19
HTTP42858 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC22.48■■□□□ 1.19
HTTP42858 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HTTP42858 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC22.48■■□□□ 1.19
HTTP42858 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC22.48■■□□□ 1.19
HTTP42858 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC22.48■■□□□ 1.19
HTTP42858 RN7SL510P-201ENST00000581311 263 ntBASIC22.48■■□□□ 1.19
HTTP42858 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC22.48■■□□□ 1.19
HTTP42858 GPX4-207ENST00000589115 812 ntTSL 2 BASIC22.48■■□□□ 1.19
HTTP42858 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HTTP42858 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
HTTP42858 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HTTP42858 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
HTTP42858 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC22.48■■□□□ 1.19
HTTP42858 AC004980.1-204ENST00000429707 299 ntBASIC22.48■■□□□ 1.19
HTTP42858 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC22.48■■□□□ 1.19
HTTP42858 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HTTP42858 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HTTP42858 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
HTTP42858 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
HTTP42858 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
HTTP42858 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC22.47■■□□□ 1.19
HTTP42858 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC22.47■■□□□ 1.19
HTTP42858 KLK8-205ENST00000593490 267 ntTSL 3 BASIC22.47■■□□□ 1.19
HTTP42858 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
HTTP42858 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.47■■□□□ 1.19
HTTP42858 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC22.47■■□□□ 1.19
HTTP42858 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
HTTP42858 RCC2P6-201ENST00000526625 1557 ntBASIC22.47■■□□□ 1.19
HTTP42858 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC22.47■■□□□ 1.19
HTTP42858 AC007663.1-201ENST00000438948 1240 ntBASIC22.47■■□□□ 1.19
HTTP42858 KRT17P6-201ENST00000453795 1220 ntBASIC22.47■■□□□ 1.19
HTTP42858 VENTXP5-201ENST00000523979 775 ntBASIC22.47■■□□□ 1.19
HTTP42858 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC22.47■■□□□ 1.19
HTTP42858 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.47■■□□□ 1.19
HTTP42858 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
HTTP42858 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
HTTP42858 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HTTP42858 MFAP1P1-201ENST00000442257 1255 ntBASIC22.46■■□□□ 1.19
HTTP42858 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC22.46■■□□□ 1.19
HTTP42858 DFFB-212ENST00000625756 649 ntTSL 5 BASIC22.46■■□□□ 1.19
HTTP42858 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
HTTP42858 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC22.46■■□□□ 1.19
HTTP42858 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.46■■□□□ 1.19
HTTP42858 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.46■■□□□ 1.19
HTTP42858 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HTTP42858 CCR12P-201ENST00000446203 998 ntBASIC22.46■■□□□ 1.19
HTTP42858 AC008040.2-201ENST00000461049 708 ntBASIC22.46■■□□□ 1.19
HTTP42858 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
HTTP42858 CR769767.2-201ENST00000622735 460 ntBASIC22.46■■□□□ 1.19
HTTP42858 FXN-203ENST00000396366 922 ntTSL 2 BASIC22.46■■□□□ 1.19
HTTP42858 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC22.46■■□□□ 1.19
HTTP42858 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.19
HTTP42858 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC22.45■■□□□ 1.18
HTTP42858 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
HTTP42858 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC22.45■■□□□ 1.18
HTTP42858 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC22.45■■□□□ 1.18
HTTP42858 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
HTTP42858 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
HTTP42858 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC22.45■■□□□ 1.18
HTTP42858 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC22.45■■□□□ 1.18
HTTP42858 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
HTTP42858 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
HTTP42858 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HTTP42858 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
HTTP42858 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC22.45■■□□□ 1.18
HTTP42858 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC22.45■■□□□ 1.18
HTTP42858 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC22.45■■□□□ 1.18
HTTP42858 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
HTTP42858 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
HTTP42858 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
HTTP42858 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HTTP42858 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
HTTP42858 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC22.44■■□□□ 1.18
HTTP42858 HYMAI.1-201ENST00000620949 238 ntBASIC22.44■■□□□ 1.18
HTTP42858 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC22.44■■□□□ 1.18
HTTP42858 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
HTTP42858 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HTTP42858 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
HTTP42858 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC22.44■■□□□ 1.18
HTTP42858 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC22.44■■□□□ 1.18
HTTP42858 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
HTTP42858 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
HTTP42858 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC22.44■■□□□ 1.18
HTTP42858 ETFA-216ENST00000560726 942 ntTSL 3 BASIC22.44■■□□□ 1.18
HTTP42858 AL441883.1-201ENST00000566170 1045 ntBASIC22.44■■□□□ 1.18
HTTP42858 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.44■■□□□ 1.18
HTTP42858 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HTTP42858 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
HTTP42858 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC22.43■■□□□ 1.18
HTTP42858 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
HTTP42858 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
HTTP42858 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HTTP42858 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HTTP42858 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HTTP42858 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms