Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC25.28■■□□□ 1.64
COL15A1P39059 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
COL15A1P39059 AC005229.4-201ENST00000610085 2198 ntBASIC25.28■■□□□ 1.64
COL15A1P39059 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC25.27■■□□□ 1.64
COL15A1P39059 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
COL15A1P39059 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC25.27■■□□□ 1.64
COL15A1P39059 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
COL15A1P39059 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
COL15A1P39059 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
COL15A1P39059 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
COL15A1P39059 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
COL15A1P39059 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
COL15A1P39059 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC25.27■■□□□ 1.64
COL15A1P39059 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC25.27■■□□□ 1.64
COL15A1P39059 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
COL15A1P39059 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC25.27■■□□□ 1.64
COL15A1P39059 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC25.27■■□□□ 1.64
COL15A1P39059 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC25.27■■□□□ 1.64
COL15A1P39059 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC25.27■■□□□ 1.64
COL15A1P39059 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC25.27■■□□□ 1.64
COL15A1P39059 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
COL15A1P39059 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
COL15A1P39059 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
COL15A1P39059 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
COL15A1P39059 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC25.26■■□□□ 1.63
COL15A1P39059 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC25.26■■□□□ 1.63
COL15A1P39059 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC25.26■■□□□ 1.63
COL15A1P39059 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC25.26■■□□□ 1.63
COL15A1P39059 ABBA01031674.1-201ENST00000635145 728 ntBASIC25.26■■□□□ 1.63
COL15A1P39059 AL031985.4-201ENST00000642138 673 ntBASIC25.26■■□□□ 1.63
COL15A1P39059 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
COL15A1P39059 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC25.25■■□□□ 1.63
COL15A1P39059 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC25.25■■□□□ 1.63
COL15A1P39059 BID-203ENST00000399765 1879 ntTSL 2 BASIC25.25■■□□□ 1.63
COL15A1P39059 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
COL15A1P39059 AC007225.1-201ENST00000566331 1836 ntBASIC25.25■■□□□ 1.63
COL15A1P39059 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC25.25■■□□□ 1.63
COL15A1P39059 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC25.25■■□□□ 1.63
COL15A1P39059 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC25.25■■□□□ 1.63
COL15A1P39059 DUX4L26-201ENST00000489078 1255 ntBASIC25.25■■□□□ 1.63
COL15A1P39059 AL445675.2-201ENST00000620291 557 ntBASIC25.25■■□□□ 1.63
COL15A1P39059 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC25.25■■□□□ 1.63
COL15A1P39059 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC25.25■■□□□ 1.63
COL15A1P39059 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
COL15A1P39059 KRT8P17-201ENST00000453110 1448 ntBASIC25.25■■□□□ 1.63
COL15A1P39059 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC25.25■■□□□ 1.63
COL15A1P39059 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC25.25■■□□□ 1.63
COL15A1P39059 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL15A1P39059 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC25.24■■□□□ 1.63
COL15A1P39059 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
COL15A1P39059 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC25.24■■□□□ 1.63
COL15A1P39059 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL15A1P39059 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL15A1P39059 PPP1R14BP5-201ENST00000440334 435 ntBASIC25.24■■□□□ 1.63
COL15A1P39059 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
COL15A1P39059 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC25.24■■□□□ 1.63
COL15A1P39059 AC010203.1-204ENST00000548782 407 ntBASIC25.24■■□□□ 1.63
COL15A1P39059 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC25.24■■□□□ 1.63
COL15A1P39059 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC25.24■■□□□ 1.63
COL15A1P39059 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL15A1P39059 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
COL15A1P39059 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC25.24■■□□□ 1.63
COL15A1P39059 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
COL15A1P39059 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL15A1P39059 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC25.24■■□□□ 1.63
COL15A1P39059 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC25.24■■□□□ 1.63
COL15A1P39059 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
COL15A1P39059 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
COL15A1P39059 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC25.23■■□□□ 1.63
COL15A1P39059 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC25.23■■□□□ 1.63
COL15A1P39059 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC25.23■■□□□ 1.63
COL15A1P39059 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC25.23■■□□□ 1.63
COL15A1P39059 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
COL15A1P39059 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
COL15A1P39059 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
COL15A1P39059 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
COL15A1P39059 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC25.23■■□□□ 1.63
COL15A1P39059 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
COL15A1P39059 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
COL15A1P39059 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
COL15A1P39059 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
COL15A1P39059 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
COL15A1P39059 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
COL15A1P39059 AP006587.1-201ENST00000534129 1502 ntBASIC25.22■■□□□ 1.63
COL15A1P39059 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC25.22■■□□□ 1.63
COL15A1P39059 FSCN1P1-201ENST00000568912 1481 ntBASIC25.22■■□□□ 1.63
COL15A1P39059 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC25.21■■□□□ 1.63
COL15A1P39059 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
COL15A1P39059 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC25.21■■□□□ 1.63
COL15A1P39059 AL137060.1-201ENST00000618151 2648 ntBASIC25.21■■□□□ 1.63
COL15A1P39059 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
COL15A1P39059 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC25.21■■□□□ 1.63
COL15A1P39059 B3GAT3P1-201ENST00000471720 806 ntBASIC25.21■■□□□ 1.63
COL15A1P39059 AP005242.2-201ENST00000580065 1175 ntBASIC25.21■■□□□ 1.63
COL15A1P39059 DGCR10-201ENST00000609839 495 ntBASIC25.21■■□□□ 1.63
COL15A1P39059 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
COL15A1P39059 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
COL15A1P39059 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
COL15A1P39059 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
COL15A1P39059 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms