Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SERBP1P1-201ENST00000396021 1160 ntBASIC14.59□□□□□ -0.07
CKS2P33552 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CKS2P33552 KRT16P3-201ENST00000439127 1283 ntBASIC14.59□□□□□ -0.07
CKS2P33552 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CKS2P33552 DUX4L19-201ENST00000557448 1267 ntBASIC14.59□□□□□ -0.07
CKS2P33552 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC14.59□□□□□ -0.07
CKS2P33552 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CKS2P33552 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
CKS2P33552 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC14.59□□□□□ -0.07
CKS2P33552 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CKS2P33552 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CKS2P33552 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CKS2P33552 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CKS2P33552 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC14.59□□□□□ -0.07
CKS2P33552 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CKS2P33552 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CKS2P33552 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CKS2P33552 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CKS2P33552 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CKS2P33552 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC14.58□□□□□ -0.07
CKS2P33552 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC14.58□□□□□ -0.07
CKS2P33552 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CKS2P33552 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC14.58□□□□□ -0.08
CKS2P33552 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CKS2P33552 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CKS2P33552 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CKS2P33552 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CKS2P33552 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CKS2P33552 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CKS2P33552 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CKS2P33552 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CKS2P33552 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC14.58□□□□□ -0.08
CKS2P33552 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC14.58□□□□□ -0.08
CKS2P33552 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CKS2P33552 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CKS2P33552 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CKS2P33552 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC14.58□□□□□ -0.08
CKS2P33552 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CKS2P33552 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
CKS2P33552 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC14.58□□□□□ -0.08
CKS2P33552 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CKS2P33552 AC005224.4-201ENST00000583262 1652 ntBASIC14.58□□□□□ -0.08
CKS2P33552 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CKS2P33552 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC14.58□□□□□ -0.08
CKS2P33552 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKS2P33552 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKS2P33552 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKS2P33552 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CKS2P33552 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKS2P33552 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKS2P33552 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CKS2P33552 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CKS2P33552 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKS2P33552 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CKS2P33552 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKS2P33552 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKS2P33552 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKS2P33552 ADK-206ENST00000541550 2222 ntTSL 2 BASIC14.57□□□□□ -0.08
CKS2P33552 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKS2P33552 AC007613.1-201ENST00000572811 2597 ntBASIC14.57□□□□□ -0.08
CKS2P33552 LINC01465-201ENST00000408887 1940 ntBASIC14.57□□□□□ -0.08
CKS2P33552 BX119927.1-201ENST00000636596 1552 ntBASIC14.57□□□□□ -0.08
CKS2P33552 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CKS2P33552 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKS2P33552 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKS2P33552 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKS2P33552 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKS2P33552 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKS2P33552 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
CKS2P33552 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKS2P33552 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC14.57□□□□□ -0.08
CKS2P33552 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC14.57□□□□□ -0.08
CKS2P33552 AC011298.3-201ENST00000615796 283 ntBASIC14.57□□□□□ -0.08
CKS2P33552 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC14.57□□□□□ -0.08
CKS2P33552 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CKS2P33552 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.57□□□□□ -0.08
CKS2P33552 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CKS2P33552 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC14.57□□□□□ -0.08
CKS2P33552 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKS2P33552 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKS2P33552 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CKS2P33552 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC14.57□□□□□ -0.08
CKS2P33552 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKS2P33552 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKS2P33552 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKS2P33552 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC14.57□□□□□ -0.08
CKS2P33552 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKS2P33552 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKS2P33552 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKS2P33552 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKS2P33552 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKS2P33552 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKS2P33552 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKS2P33552 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC14.56□□□□□ -0.08
CKS2P33552 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CKS2P33552 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.56□□□□□ -0.08
CKS2P33552 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKS2P33552 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CKS2P33552 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKS2P33552 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms