Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.75■□□□□ 0.91
HOXA9P31269 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXA9P31269 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.75■□□□□ 0.91
HOXA9P31269 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXA9P31269 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
HOXA9P31269 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.75■□□□□ 0.91
HOXA9P31269 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXA9P31269 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.75■□□□□ 0.91
HOXA9P31269 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXA9P31269 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA9P31269 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA9P31269 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.74■□□□□ 0.91
HOXA9P31269 DPP3P2-201ENST00000416030 1696 ntBASIC20.74■□□□□ 0.91
HOXA9P31269 MESTP1-201ENST00000404287 994 ntBASIC20.74■□□□□ 0.91
HOXA9P31269 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA9P31269 KRT18P35-201ENST00000510488 1269 ntBASIC20.74■□□□□ 0.91
HOXA9P31269 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
HOXA9P31269 AL049597.2-201ENST00000565575 961 ntBASIC20.74■□□□□ 0.91
HOXA9P31269 AP005242.2-201ENST00000580065 1175 ntBASIC20.74■□□□□ 0.91
HOXA9P31269 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.74■□□□□ 0.91
HOXA9P31269 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.74■□□□□ 0.91
HOXA9P31269 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
HOXA9P31269 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA9P31269 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA9P31269 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA9P31269 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.73■□□□□ 0.91
HOXA9P31269 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA9P31269 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
HOXA9P31269 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA9P31269 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA9P31269 FP700111.2-201ENST00000619190 1892 ntBASIC20.73■□□□□ 0.91
HOXA9P31269 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.73■□□□□ 0.91
HOXA9P31269 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA9P31269 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA9P31269 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.73■□□□□ 0.91
HOXA9P31269 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA9P31269 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA9P31269 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
HOXA9P31269 AC006128.1-201ENST00000624704 1661 ntBASIC20.73■□□□□ 0.91
HOXA9P31269 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA9P31269 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.73■□□□□ 0.91
HOXA9P31269 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HOXA9P31269 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXA9P31269 TERF1P1-201ENST00000311003 1181 ntBASIC20.72■□□□□ 0.91
HOXA9P31269 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
HOXA9P31269 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.72■□□□□ 0.91
HOXA9P31269 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.72■□□□□ 0.91
HOXA9P31269 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.72■□□□□ 0.91
HOXA9P31269 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.72■□□□□ 0.91
HOXA9P31269 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.72■□□□□ 0.91
HOXA9P31269 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
HOXA9P31269 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.72■□□□□ 0.91
HOXA9P31269 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.72■□□□□ 0.91
HOXA9P31269 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HOXA9P31269 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.72■□□□□ 0.91
HOXA9P31269 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXA9P31269 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXA9P31269 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXA9P31269 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
HOXA9P31269 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.71■□□□□ 0.91
HOXA9P31269 AC073508.3-201ENST00000619697 1419 ntBASIC20.71■□□□□ 0.91
HOXA9P31269 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXA9P31269 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXA9P31269 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.71■□□□□ 0.91
HOXA9P31269 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
HOXA9P31269 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXA9P31269 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
HOXA9P31269 TUBB8P6-201ENST00000436895 1288 ntBASIC20.71■□□□□ 0.91
HOXA9P31269 SLC25A3P1-201ENST00000443844 931 ntBASIC20.71■□□□□ 0.91
HOXA9P31269 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.71■□□□□ 0.91
HOXA9P31269 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXA9P31269 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.71■□□□□ 0.91
HOXA9P31269 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.71■□□□□ 0.91
HOXA9P31269 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXA9P31269 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXA9P31269 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
HOXA9P31269 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXA9P31269 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXA9P31269 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXA9P31269 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXA9P31269 AC018553.1-201ENST00000616682 1458 ntBASIC20.7■□□□□ 0.9
HOXA9P31269 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXA9P31269 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HOXA9P31269 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
HOXA9P31269 AL137013.1-201ENST00000432946 1228 ntBASIC20.7■□□□□ 0.9
HOXA9P31269 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.7■□□□□ 0.9
HOXA9P31269 B3GAT3P1-201ENST00000471720 806 ntBASIC20.7■□□□□ 0.9
HOXA9P31269 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.7■□□□□ 0.9
HOXA9P31269 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.7■□□□□ 0.9
HOXA9P31269 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.7■□□□□ 0.9
HOXA9P31269 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.7■□□□□ 0.9
HOXA9P31269 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.7■□□□□ 0.9
HOXA9P31269 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.7■□□□□ 0.9
HOXA9P31269 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXA9P31269 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
HOXA9P31269 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXA9P31269 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXA9P31269 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXA9P31269 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
HOXA9P31269 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms