Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COL8A2P25067 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COL8A2P25067 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL8A2P25067 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COL8A2P25067 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.78■□□□□ 0.28
COL8A2P25067 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.77■□□□□ 0.28
COL8A2P25067 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COL8A2P25067 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COL8A2P25067 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
COL8A2P25067 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.77■□□□□ 0.28
COL8A2P25067 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
COL8A2P25067 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COL8A2P25067 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COL8A2P25067 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
COL8A2P25067 RPS2P55-201ENST00000397318 883 ntBASIC16.77■□□□□ 0.28
COL8A2P25067 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
COL8A2P25067 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COL8A2P25067 AC107956.1-201ENST00000494359 873 ntBASIC16.77■□□□□ 0.28
COL8A2P25067 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.77■□□□□ 0.28
COL8A2P25067 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.77■□□□□ 0.28
COL8A2P25067 MIR4497-201ENST00000583208 89 ntBASIC16.77■□□□□ 0.28
COL8A2P25067 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.77■□□□□ 0.28
COL8A2P25067 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COL8A2P25067 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COL8A2P25067 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.77■□□□□ 0.28
COL8A2P25067 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COL8A2P25067 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.77■□□□□ 0.27
COL8A2P25067 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.77■□□□□ 0.27
COL8A2P25067 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
COL8A2P25067 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.77■□□□□ 0.27
COL8A2P25067 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
COL8A2P25067 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
COL8A2P25067 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.77■□□□□ 0.27
COL8A2P25067 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
COL8A2P25067 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
COL8A2P25067 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
COL8A2P25067 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL8A2P25067 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL8A2P25067 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL8A2P25067 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.76■□□□□ 0.27
COL8A2P25067 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL8A2P25067 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.76■□□□□ 0.27
COL8A2P25067 NBPF21P-201ENST00000425093 1451 ntBASIC16.76■□□□□ 0.27
COL8A2P25067 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL8A2P25067 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
COL8A2P25067 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
COL8A2P25067 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.76■□□□□ 0.27
COL8A2P25067 SNORA78-201ENST00000459373 127 ntBASIC16.76■□□□□ 0.27
COL8A2P25067 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.76■□□□□ 0.27
COL8A2P25067 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.76■□□□□ 0.27
COL8A2P25067 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.76■□□□□ 0.27
COL8A2P25067 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL8A2P25067 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
COL8A2P25067 AL121906.2-201ENST00000621597 723 ntBASIC16.76■□□□□ 0.27
COL8A2P25067 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.76■□□□□ 0.27
COL8A2P25067 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL8A2P25067 SMG8-203ENST00000578922 2178 ntBASIC16.76■□□□□ 0.27
COL8A2P25067 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL8A2P25067 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL8A2P25067 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL8A2P25067 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.76■□□□□ 0.27
COL8A2P25067 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL8A2P25067 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.76■□□□□ 0.27
COL8A2P25067 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.75■□□□□ 0.27
COL8A2P25067 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL8A2P25067 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COL8A2P25067 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL8A2P25067 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.75■□□□□ 0.27
COL8A2P25067 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COL8A2P25067 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL8A2P25067 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
COL8A2P25067 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.75■□□□□ 0.27
COL8A2P25067 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.75■□□□□ 0.27
COL8A2P25067 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COL8A2P25067 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.75■□□□□ 0.27
COL8A2P25067 AC233702.5-201ENST00000584107 538 ntBASIC16.75■□□□□ 0.27
COL8A2P25067 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COL8A2P25067 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.75■□□□□ 0.27
COL8A2P25067 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COL8A2P25067 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
COL8A2P25067 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.75■□□□□ 0.27
COL8A2P25067 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL8A2P25067 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL8A2P25067 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.75■□□□□ 0.27
COL8A2P25067 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL8A2P25067 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL8A2P25067 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
COL8A2P25067 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
COL8A2P25067 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COL8A2P25067 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.74■□□□□ 0.27
COL8A2P25067 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL8A2P25067 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL8A2P25067 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL8A2P25067 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL8A2P25067 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COL8A2P25067 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COL8A2P25067 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COL8A2P25067 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
COL8A2P25067 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.74■□□□□ 0.27
COL8A2P25067 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms