Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.499e-8■■■■□ 22.8
RPS3P23396 TOMM22-202ENST00000492561 782 ntTSL 218.11■□□□□ 0.494e-6■■■■□ 22.8
RPS3P23396 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.1■□□□□ 0.494e-6■■■■□ 22.8
RPS3P23396 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.08■□□□□ 0.483e-6■■■■□ 22.8
RPS3P23396 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.483e-11■■■■□ 22.8
RPS3P23396 SYNGR2-204ENST00000589168 2125 ntTSL 217.87■□□□□ 0.451e-6■■■■□ 22.8
RPS3P23396 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.454e-6■■■■□ 22.8
RPS3P23396 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.454e-6■■■■□ 22.8
RPS3P23396 SYNGR2-205ENST00000589183 796 ntTSL 317.83■□□□□ 0.441e-6■■■■□ 22.8
RPS3P23396 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.59■□□□□ 0.414e-18■■■■□ 22.8
RPS3P23396 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.44e-6■■■■□ 22.8
RPS3P23396 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.49e-8■■■■□ 22.8
RPS3P23396 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.54■□□□□ 0.44e-6■■■■□ 22.8
RPS3P23396 CYBRD1-204ENST00000445146 682 ntTSL 317.49■□□□□ 0.394e-6■■■■□ 22.8
RPS3P23396 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.383e-6■■■■□ 22.8
RPS3P23396 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.33■□□□□ 0.371e-6■■■■□ 22.8
RPS3P23396 CYBRD1-207ENST00000494587 549 ntTSL 417.21■□□□□ 0.354e-6■■■■□ 22.8
RPS3P23396 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.321e-6■■■■□ 22.8
RPS3P23396 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.81■□□□□ 0.282e-7■■■■□ 22.8
RPS3P23396 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.67■□□□□ 0.263e-6■■■■□ 22.8
RPS3P23396 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.263e-6■■■■□ 22.8
RPS3P23396 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.254e-6■■■■□ 22.8
RPS3P23396 BABAM1-210ENST00000598567 534 ntAPPRIS ALT2 TSL 316.61■□□□□ 0.254e-6■■■■□ 22.8
RPS3P23396 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.253e-11■■■■□ 22.8
RPS3P23396 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.234e-6■■■■□ 22.8
RPS3P23396 BABAM1-215ENST00000601232 690 ntTSL 516.22■□□□□ 0.194e-6■■■■□ 22.8
RPS3P23396 MKNK2-207ENST00000588014 2413 ntTSL 216.09■□□□□ 0.174e-6■■■■□ 22.8
RPS3P23396 CIZ1-220ENST00000485862 843 ntTSL 215.9■□□□□ 0.143e-11■■■■□ 22.8
RPS3P23396 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.114e-6■■■■□ 22.8
RPS3P23396 CYBRD1-205ENST00000468308 763 ntTSL 315.67■□□□□ 0.14e-6■■■■□ 22.8
RPS3P23396 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.094e-6■■■■□ 22.8
RPS3P23396 EIF4G2-228ENST00000534246 523 ntTSL 215.6■□□□□ 0.096e-12■■■■□ 22.8
RPS3P23396 ATP13A2-213ENST00000510069 962 ntTSL 515.42■□□□□ 0.064e-6■■■■□ 22.8
RPS3P23396 TADA3-203ENST00000439043 873 ntTSL 215.36■□□□□ 0.054e-6■■■■□ 22.8
RPS3P23396 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.34■□□□□ 0.059e-7■■■■□ 22.8
RPS3P23396 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.32■□□□□ 0.041e-6■■■■□ 22.8
RPS3P23396 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.039e-8■■■■□ 22.8
RPS3P23396 MAP4-201ENST00000335271 1564 ntAPPRIS ALT2 TSL 215.11■□□□□ 0.013e-11■■■■□ 22.8
RPS3P23396 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.84□□□□□ -0.034e-6■■■■□ 22.8
RPS3P23396 ATP13A2-212ENST00000509619 570 ntTSL 414.77□□□□□ -0.054e-6■■■■□ 22.8
RPS3P23396 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.57□□□□□ -0.084e-6■■■■□ 22.8
RPS3P23396 CYBRD1-206ENST00000474182 465 ntTSL 514.56□□□□□ -0.084e-6■■■■□ 22.8
RPS3P23396 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.55□□□□□ -0.084e-6■■■■□ 22.8
RPS3P23396 SF3A2-207ENST00000592839 724 ntTSL 214.43□□□□□ -0.14e-6■■■■□ 22.8
RPS3P23396 SF3A2-202ENST00000586396 543 ntAPPRIS ALT2 TSL 314.43□□□□□ -0.14e-6■■■■□ 22.8
RPS3P23396 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.126e-8■■■■□ 22.8
RPS3P23396 EIF4G2-210ENST00000527419 571 ntTSL 514.26□□□□□ -0.131e-7■■■■□ 22.8
RPS3P23396 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.134e-6■■■■□ 22.8
RPS3P23396 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.21□□□□□ -0.134e-6■■■■□ 22.8
RPS3P23396 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.19□□□□□ -0.146e-8■■■■□ 22.8
RPS3P23396 SF3A2-204ENST00000589118 759 ntTSL 214.15□□□□□ -0.144e-6■■■■□ 22.8
RPS3P23396 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.164e-6■■■■□ 22.8
RPS3P23396 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.161e-8■■■■□ 22.8
RPS3P23396 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14□□□□□ -0.174e-6■■■■□ 22.8
RPS3P23396 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.174e-6■■■■□ 22.8
RPS3P23396 RSL24D1-205ENST00000565854 605 ntTSL 513.94□□□□□ -0.184e-6■■■■□ 22.8
RPS3P23396 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.199e-8■■■■□ 22.8
RPS3P23396 JUP-211ENST00000589036 566 ntTSL 413.85□□□□□ -0.194e-6■■■■□ 22.8
RPS3P23396 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.83□□□□□ -0.24e-6■■■■□ 22.8
RPS3P23396 ANKZF1-218ENST00000477479 2940 ntTSL 1 (best)13.82□□□□□ -0.24e-6■■■■□ 22.8
RPS3P23396 CARHSP1-212ENST00000568968 461 ntTSL 213.8□□□□□ -0.21e-7■■■■□ 22.8
RPS3P23396 ANKZF1-211ENST00000463792 3245 ntTSL 213.77□□□□□ -0.214e-6■■■■□ 22.8
RPS3P23396 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.69□□□□□ -0.223e-6■■■■□ 22.8
RPS3P23396 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.239e-8■■■■□ 22.8
RPS3P23396 OGFOD1-208ENST00000568172 537 ntTSL 413.57□□□□□ -0.244e-6■■■■□ 22.8
RPS3P23396 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.244e-6■■■■□ 22.8
RPS3P23396 CARHSP1-211ENST00000568117 521 ntTSL 313.54□□□□□ -0.241e-7■■■■□ 22.8
RPS3P23396 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.264e-6■■■■□ 22.8
RPS3P23396 CARHSP1-210ENST00000567908 565 ntTSL 213.35□□□□□ -0.271e-7■■■■□ 22.8
RPS3P23396 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.282e-7■■■■□ 22.8
RPS3P23396 SF3A2-205ENST00000590034 573 ntTSL 313.22□□□□□ -0.294e-6■■■■□ 22.8
RPS3P23396 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.39e-8■■■■□ 22.8
RPS3P23396 OGFOD1-204ENST00000563733 734 ntTSL 213.13□□□□□ -0.314e-6■■■■□ 22.8
RPS3P23396 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.329e-8■■■■□ 22.8
RPS3P23396 BABAM1-204ENST00000594247 1004 ntTSL 512.93□□□□□ -0.344e-6■■■■□ 22.8
RPS3P23396 CARHSP1-207ENST00000565287 556 ntTSL 312.79□□□□□ -0.361e-7■■■■□ 22.8
RPS3P23396 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.389e-8■■■■□ 22.8
RPS3P23396 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.43e-11■■■■□ 22.8
RPS3P23396 AXIN1-202ENST00000354866 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.43e-11■■■■□ 22.8
RPS3P23396 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.419e-8■■■■□ 22.8
RPS3P23396 ARNT-204ENST00000471844 3703 ntTSL 212.37□□□□□ -0.434e-6■■■■□ 22.8
RPS3P23396 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.434e-6■■■■□ 22.8
RPS3P23396 EIF4G2-216ENST00000530702 563 ntTSL 212.36□□□□□ -0.431e-7■■■■□ 22.8
RPS3P23396 MKNK2-206ENST00000587416 4093 ntTSL 212.24□□□□□ -0.454e-6■■■■□ 22.8
RPS3P23396 PTPA-219ENST00000435305 530 ntTSL 2 BASIC12.22□□□□□ -0.454e-6■■■■□ 22.8
RPS3P23396 BAG6-252ENST00000453833 554 ntTSL 512.22□□□□□ -0.451e-9■■■■□ 22.8
RPS3P23396 MKNK2-208ENST00000589441 803 ntTSL 512.19□□□□□ -0.464e-6■■■■□ 22.8
RPS3P23396 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.482e-7■■■■□ 22.8
RPS3P23396 ATP13A2-201ENST00000326735 3840 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.494e-6■■■■□ 22.8
RPS3P23396 CIZ1-228ENST00000634901 3462 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.53e-11■■■■□ 22.8
RPS3P23396 SYNGR2-209ENST00000592456 3036 nt11.9□□□□□ -0.51e-6■■■■□ 22.8
RPS3P23396 ANKZF1-203ENST00000410034 2486 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.514e-6■■■■□ 22.8
RPS3P23396 NR2F2-203ENST00000421109 2214 ntTSL 1 (best) BASIC11.83□□□□□ -0.524e-6■■■■□ 22.8
RPS3P23396 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC11.57□□□□□ -0.564e-6■■■■□ 22.8
RPS3P23396 CIZ1-201ENST00000277465 2742 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.573e-11■■■■□ 22.8
RPS3P23396 JUP-207ENST00000437369 586 ntTSL 311.45□□□□□ -0.584e-6■■■■□ 22.8
RPS3P23396 MKNK2-213ENST00000591601 3582 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.584e-6■■■■□ 22.8
RPS3P23396 CYBRD1-202ENST00000375252 3540 ntTSL 1 (best) BASIC11.36□□□□□ -0.594e-6■■■■□ 22.8
RPS3P23396 TRAFD1-202ENST00000412615 2697 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.594e-6■■■■□ 22.8
RPS3P23396 CIZ1-225ENST00000538431 2996 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.63e-11■■■■□ 22.8
Retrieved 100 of 24,271 protein–RNA pairs in 156.8 ms