Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.4■□□□□ 0.38
ATF1P18846 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATF1P18846 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATF1P18846 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.4■□□□□ 0.38
ATF1P18846 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ATF1P18846 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATF1P18846 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATF1P18846 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
ATF1P18846 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATF1P18846 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATF1P18846 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.4■□□□□ 0.38
ATF1P18846 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.4■□□□□ 0.38
ATF1P18846 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATF1P18846 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.39■□□□□ 0.38
ATF1P18846 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
ATF1P18846 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATF1P18846 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATF1P18846 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATF1P18846 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.39■□□□□ 0.37
ATF1P18846 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.39■□□□□ 0.37
ATF1P18846 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATF1P18846 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.39■□□□□ 0.37
ATF1P18846 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.39■□□□□ 0.37
ATF1P18846 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATF1P18846 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATF1P18846 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.39■□□□□ 0.37
ATF1P18846 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.39■□□□□ 0.37
ATF1P18846 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
ATF1P18846 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATF1P18846 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATF1P18846 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ATF1P18846 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
ATF1P18846 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATF1P18846 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.39■□□□□ 0.37
ATF1P18846 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATF1P18846 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATF1P18846 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATF1P18846 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.38■□□□□ 0.37
ATF1P18846 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATF1P18846 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATF1P18846 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATF1P18846 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.38■□□□□ 0.37
ATF1P18846 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.38■□□□□ 0.37
ATF1P18846 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATF1P18846 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ATF1P18846 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATF1P18846 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.38■□□□□ 0.37
ATF1P18846 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATF1P18846 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATF1P18846 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.38■□□□□ 0.37
ATF1P18846 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ATF1P18846 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ATF1P18846 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.38■□□□□ 0.37
ATF1P18846 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.38■□□□□ 0.37
ATF1P18846 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.38■□□□□ 0.37
ATF1P18846 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATF1P18846 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
ATF1P18846 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATF1P18846 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATF1P18846 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATF1P18846 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
ATF1P18846 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATF1P18846 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.38■□□□□ 0.37
ATF1P18846 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.38■□□□□ 0.37
ATF1P18846 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
ATF1P18846 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATF1P18846 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATF1P18846 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.38■□□□□ 0.37
ATF1P18846 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.37■□□□□ 0.37
ATF1P18846 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ATF1P18846 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.37■□□□□ 0.37
ATF1P18846 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATF1P18846 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
ATF1P18846 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATF1P18846 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ATF1P18846 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.37■□□□□ 0.37
ATF1P18846 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
ATF1P18846 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
ATF1P18846 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
ATF1P18846 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATF1P18846 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ATF1P18846 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATF1P18846 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATF1P18846 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATF1P18846 PGM5P4-201ENST00000421970 445 ntBASIC17.37■□□□□ 0.37
ATF1P18846 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.37■□□□□ 0.37
ATF1P18846 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATF1P18846 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.37■□□□□ 0.37
ATF1P18846 AC120498.9-201ENST00000339021 3867 ntBASIC17.37■□□□□ 0.37
ATF1P18846 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.37■□□□□ 0.37
ATF1P18846 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ATF1P18846 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.37■□□□□ 0.37
ATF1P18846 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATF1P18846 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATF1P18846 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.37■□□□□ 0.37
ATF1P18846 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ATF1P18846 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ATF1P18846 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
ATF1P18846 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.37■□□□□ 0.37
ATF1P18846 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms