Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.44■□□□□ 0.86
ERCC2P18074 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.44■□□□□ 0.86
ERCC2P18074 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
ERCC2P18074 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.44■□□□□ 0.86
ERCC2P18074 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ERCC2P18074 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.44■□□□□ 0.86
ERCC2P18074 SOX15-203ENST00000570788 1093 ntBASIC20.44■□□□□ 0.86
ERCC2P18074 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.44■□□□□ 0.86
ERCC2P18074 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ERCC2P18074 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ERCC2P18074 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ERCC2P18074 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ERCC2P18074 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.44■□□□□ 0.86
ERCC2P18074 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ERCC2P18074 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
ERCC2P18074 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ERCC2P18074 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ERCC2P18074 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.43■□□□□ 0.86
ERCC2P18074 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.43■□□□□ 0.86
ERCC2P18074 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ERCC2P18074 RNA5SP413-201ENST00000516373 109 ntBASIC20.43■□□□□ 0.86
ERCC2P18074 KRT18P6-201ENST00000555540 1265 ntBASIC20.43■□□□□ 0.86
ERCC2P18074 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.43■□□□□ 0.86
ERCC2P18074 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.43■□□□□ 0.86
ERCC2P18074 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
ERCC2P18074 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ERCC2P18074 AC124283.5-201ENST00000624661 1809 ntBASIC20.43■□□□□ 0.86
ERCC2P18074 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
ERCC2P18074 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.43■□□□□ 0.86
ERCC2P18074 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.43■□□□□ 0.86
ERCC2P18074 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
ERCC2P18074 AC009237.14-201ENST00000609975 1594 ntBASIC20.42■□□□□ 0.86
ERCC2P18074 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
ERCC2P18074 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC2P18074 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.42■□□□□ 0.86
ERCC2P18074 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC2P18074 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC2P18074 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC2P18074 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.42■□□□□ 0.86
ERCC2P18074 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC2P18074 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC2P18074 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC2P18074 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.42■□□□□ 0.86
ERCC2P18074 RPS2P52-201ENST00000469610 820 ntBASIC20.42■□□□□ 0.86
ERCC2P18074 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.42■□□□□ 0.86
ERCC2P18074 UNC93B5-201ENST00000530315 699 ntBASIC20.42■□□□□ 0.86
ERCC2P18074 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC2P18074 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
ERCC2P18074 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.42■□□□□ 0.86
ERCC2P18074 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC2P18074 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.42■□□□□ 0.86
ERCC2P18074 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.41■□□□□ 0.86
ERCC2P18074 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ERCC2P18074 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.41■□□□□ 0.86
ERCC2P18074 AC125437.2-201ENST00000625180 2167 ntBASIC20.41■□□□□ 0.86
ERCC2P18074 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ERCC2P18074 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ERCC2P18074 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
ERCC2P18074 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ERCC2P18074 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.41■□□□□ 0.86
ERCC2P18074 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.41■□□□□ 0.86
ERCC2P18074 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
ERCC2P18074 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.41■□□□□ 0.86
ERCC2P18074 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.41■□□□□ 0.86
ERCC2P18074 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.41■□□□□ 0.86
ERCC2P18074 AC120498.8-201ENST00000614275 531 ntBASIC20.41■□□□□ 0.86
ERCC2P18074 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.41■□□□□ 0.86
ERCC2P18074 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
ERCC2P18074 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
ERCC2P18074 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
ERCC2P18074 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
ERCC2P18074 AP001271.2-201ENST00000624018 1556 ntBASIC20.41■□□□□ 0.86
ERCC2P18074 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ERCC2P18074 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ERCC2P18074 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ERCC2P18074 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ERCC2P18074 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.41■□□□□ 0.86
ERCC2P18074 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ERCC2P18074 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ERCC2P18074 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.41■□□□□ 0.86
ERCC2P18074 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ERCC2P18074 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ERCC2P18074 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ERCC2P18074 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
ERCC2P18074 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ERCC2P18074 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ERCC2P18074 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ERCC2P18074 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ERCC2P18074 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ERCC2P18074 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
ERCC2P18074 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.4■□□□□ 0.86
ERCC2P18074 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ERCC2P18074 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.4■□□□□ 0.86
ERCC2P18074 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.4■□□□□ 0.86
ERCC2P18074 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.4■□□□□ 0.86
ERCC2P18074 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.4■□□□□ 0.86
ERCC2P18074 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.4■□□□□ 0.86
ERCC2P18074 UNC93B4-201ENST00000505679 747 ntBASIC20.4■□□□□ 0.86
ERCC2P18074 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.4■□□□□ 0.86
ERCC2P18074 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms