Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
UBL4AP11441 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
UBL4AP11441 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
UBL4AP11441 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
UBL4AP11441 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.33■□□□□ 0.53
UBL4AP11441 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
UBL4AP11441 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
UBL4AP11441 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.33■□□□□ 0.52
UBL4AP11441 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
UBL4AP11441 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.33■□□□□ 0.52
UBL4AP11441 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.33■□□□□ 0.52
UBL4AP11441 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.33■□□□□ 0.52
UBL4AP11441 AC023632.3-201ENST00000521633 145 ntBASIC18.33■□□□□ 0.52
UBL4AP11441 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.33■□□□□ 0.52
UBL4AP11441 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBL4AP11441 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBL4AP11441 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBL4AP11441 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
UBL4AP11441 PCDHAC2-203ENST00000615316 3011 ntBASIC18.33■□□□□ 0.52
UBL4AP11441 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBL4AP11441 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBL4AP11441 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBL4AP11441 KRT16P6-202ENST00000425692 1426 ntBASIC18.32■□□□□ 0.52
UBL4AP11441 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBL4AP11441 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UBL4AP11441 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UBL4AP11441 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.32■□□□□ 0.52
UBL4AP11441 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.32■□□□□ 0.52
UBL4AP11441 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
UBL4AP11441 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBL4AP11441 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UBL4AP11441 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.32■□□□□ 0.52
UBL4AP11441 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.32■□□□□ 0.52
UBL4AP11441 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBL4AP11441 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.32■□□□□ 0.52
UBL4AP11441 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.32■□□□□ 0.52
UBL4AP11441 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.32■□□□□ 0.52
UBL4AP11441 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UBL4AP11441 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBL4AP11441 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBL4AP11441 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBL4AP11441 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBL4AP11441 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.32■□□□□ 0.52
UBL4AP11441 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
UBL4AP11441 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UBL4AP11441 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBL4AP11441 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBL4AP11441 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBL4AP11441 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBL4AP11441 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.31■□□□□ 0.52
UBL4AP11441 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
UBL4AP11441 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBL4AP11441 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
UBL4AP11441 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
UBL4AP11441 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.31■□□□□ 0.52
UBL4AP11441 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBL4AP11441 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.31■□□□□ 0.52
UBL4AP11441 AC091874.3-201ENST00000512672 1195 ntBASIC18.31■□□□□ 0.52
UBL4AP11441 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.31■□□□□ 0.52
UBL4AP11441 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
UBL4AP11441 AC104771.1-201ENST00000603335 964 ntBASIC18.31■□□□□ 0.52
UBL4AP11441 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.31■□□□□ 0.52
UBL4AP11441 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBL4AP11441 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.31■□□□□ 0.52
UBL4AP11441 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBL4AP11441 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.31■□□□□ 0.52
UBL4AP11441 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.31■□□□□ 0.52
UBL4AP11441 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBL4AP11441 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBL4AP11441 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBL4AP11441 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.31■□□□□ 0.52
UBL4AP11441 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBL4AP11441 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBL4AP11441 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.31■□□□□ 0.52
UBL4AP11441 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.31■□□□□ 0.52
UBL4AP11441 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.3■□□□□ 0.52
UBL4AP11441 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
UBL4AP11441 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBL4AP11441 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBL4AP11441 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
UBL4AP11441 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
UBL4AP11441 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.3■□□□□ 0.52
UBL4AP11441 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBL4AP11441 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.3■□□□□ 0.52
UBL4AP11441 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.3■□□□□ 0.52
UBL4AP11441 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.3■□□□□ 0.52
UBL4AP11441 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.3■□□□□ 0.52
UBL4AP11441 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UBL4AP11441 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
UBL4AP11441 AL138781.1-201ENST00000566567 1274 ntBASIC18.3■□□□□ 0.52
UBL4AP11441 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBL4AP11441 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBL4AP11441 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UBL4AP11441 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBL4AP11441 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
UBL4AP11441 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBL4AP11441 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.3■□□□□ 0.52
UBL4AP11441 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBL4AP11441 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBL4AP11441 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms