Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC25.38■■□□□ 1.65
SNRPA1P09661 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SNRPA1P09661 RCN1P1-201ENST00000400413 996 ntBASIC25.38■■□□□ 1.65
SNRPA1P09661 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC25.38■■□□□ 1.65
SNRPA1P09661 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC25.38■■□□□ 1.65
SNRPA1P09661 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC25.38■■□□□ 1.65
SNRPA1P09661 GLDC-219ENST00000640208 420 ntTSL 2 BASIC25.38■■□□□ 1.65
SNRPA1P09661 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
SNRPA1P09661 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SNRPA1P09661 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
SNRPA1P09661 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC25.38■■□□□ 1.65
SNRPA1P09661 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC25.38■■□□□ 1.65
SNRPA1P09661 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
SNRPA1P09661 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC25.37■■□□□ 1.65
SNRPA1P09661 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
SNRPA1P09661 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
SNRPA1P09661 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SNRPA1P09661 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SNRPA1P09661 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
SNRPA1P09661 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
SNRPA1P09661 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SNRPA1P09661 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SNRPA1P09661 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC25.37■■□□□ 1.65
SNRPA1P09661 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC25.37■■□□□ 1.65
SNRPA1P09661 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC25.37■■□□□ 1.65
SNRPA1P09661 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC25.37■■□□□ 1.65
SNRPA1P09661 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC25.37■■□□□ 1.65
SNRPA1P09661 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC25.37■■□□□ 1.65
SNRPA1P09661 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC25.37■■□□□ 1.65
SNRPA1P09661 AL445675.2-201ENST00000620291 557 ntBASIC25.37■■□□□ 1.65
SNRPA1P09661 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC25.37■■□□□ 1.65
SNRPA1P09661 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
SNRPA1P09661 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SNRPA1P09661 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
SNRPA1P09661 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SNRPA1P09661 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC25.37■■□□□ 1.65
SNRPA1P09661 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
SNRPA1P09661 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
SNRPA1P09661 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SNRPA1P09661 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SNRPA1P09661 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC25.36■■□□□ 1.65
SNRPA1P09661 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SNRPA1P09661 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC25.36■■□□□ 1.65
SNRPA1P09661 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC25.36■■□□□ 1.65
SNRPA1P09661 MIR1238-201ENST00000408483 83 ntBASIC25.36■■□□□ 1.65
SNRPA1P09661 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC25.36■■□□□ 1.65
SNRPA1P09661 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC25.36■■□□□ 1.65
SNRPA1P09661 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC25.36■■□□□ 1.65
SNRPA1P09661 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC25.36■■□□□ 1.65
SNRPA1P09661 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SNRPA1P09661 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC25.36■■□□□ 1.65
SNRPA1P09661 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SNRPA1P09661 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
SNRPA1P09661 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC25.35■■□□□ 1.65
SNRPA1P09661 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SNRPA1P09661 ME2-216ENST00000639850 2331 ntTSL 5 BASIC25.35■■□□□ 1.65
SNRPA1P09661 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SNRPA1P09661 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SNRPA1P09661 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
SNRPA1P09661 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SNRPA1P09661 PPP1R14BP5-201ENST00000440334 435 ntBASIC25.35■■□□□ 1.65
SNRPA1P09661 AC145285.6-201ENST00000604632 637 ntBASIC25.35■■□□□ 1.65
SNRPA1P09661 AC010331.1-201ENST00000611423 582 ntBASIC25.35■■□□□ 1.65
SNRPA1P09661 AL031985.4-201ENST00000642138 673 ntBASIC25.35■■□□□ 1.65
SNRPA1P09661 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC25.35■■□□□ 1.65
SNRPA1P09661 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC25.35■■□□□ 1.65
SNRPA1P09661 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SNRPA1P09661 GOLGA6L3-201ENST00000507199 1679 ntBASIC25.35■■□□□ 1.65
SNRPA1P09661 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SNRPA1P09661 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
SNRPA1P09661 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SNRPA1P09661 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC25.34■■□□□ 1.65
SNRPA1P09661 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC25.34■■□□□ 1.65
SNRPA1P09661 TUBB8P6-201ENST00000436895 1288 ntBASIC25.34■■□□□ 1.65
SNRPA1P09661 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SNRPA1P09661 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC25.34■■□□□ 1.65
SNRPA1P09661 FITM1-202ENST00000559294 800 ntBASIC25.34■■□□□ 1.65
SNRPA1P09661 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC25.34■■□□□ 1.65
SNRPA1P09661 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC25.34■■□□□ 1.65
SNRPA1P09661 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC25.34■■□□□ 1.65
SNRPA1P09661 MIR6786-201ENST00000616843 113 ntBASIC25.34■■□□□ 1.65
SNRPA1P09661 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC25.34■■□□□ 1.65
SNRPA1P09661 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC25.34■■□□□ 1.65
SNRPA1P09661 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
SNRPA1P09661 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SNRPA1P09661 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
SNRPA1P09661 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC25.34■■□□□ 1.65
SNRPA1P09661 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
SNRPA1P09661 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
SNRPA1P09661 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
SNRPA1P09661 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SNRPA1P09661 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
SNRPA1P09661 TK2-213ENST00000563369 882 ntTSL 5 BASIC25.33■■□□□ 1.65
SNRPA1P09661 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC25.33■■□□□ 1.65
SNRPA1P09661 ABBA01031674.1-201ENST00000635145 728 ntBASIC25.33■■□□□ 1.65
SNRPA1P09661 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
SNRPA1P09661 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.64
SNRPA1P09661 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
SNRPA1P09661 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SNRPA1P09661 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms