Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CD74P04233 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CD74P04233 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD74P04233 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD74P04233 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CD74P04233 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.68■□□□□ 0.26
CD74P04233 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD74P04233 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.68■□□□□ 0.26
CD74P04233 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.68■□□□□ 0.26
CD74P04233 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CD74P04233 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CD74P04233 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CD74P04233 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CD74P04233 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD74P04233 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CD74P04233 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.67■□□□□ 0.26
CD74P04233 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD74P04233 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CD74P04233 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD74P04233 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD74P04233 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD74P04233 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD74P04233 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.67■□□□□ 0.26
CD74P04233 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CD74P04233 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.67■□□□□ 0.26
CD74P04233 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CD74P04233 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.67■□□□□ 0.26
CD74P04233 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.67■□□□□ 0.26
CD74P04233 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.67■□□□□ 0.26
CD74P04233 AP001271.2-201ENST00000624018 1556 ntBASIC16.67■□□□□ 0.26
CD74P04233 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.67■□□□□ 0.26
CD74P04233 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.67■□□□□ 0.26
CD74P04233 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.67■□□□□ 0.26
CD74P04233 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CD74P04233 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CD74P04233 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD74P04233 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CD74P04233 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD74P04233 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD74P04233 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD74P04233 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD74P04233 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD74P04233 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CD74P04233 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD74P04233 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD74P04233 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD74P04233 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD74P04233 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD74P04233 AL136116.3-201ENST00000402907 1138 ntBASIC16.66■□□□□ 0.26
CD74P04233 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CD74P04233 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.66■□□□□ 0.26
CD74P04233 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.66■□□□□ 0.26
CD74P04233 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD74P04233 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
CD74P04233 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CD74P04233 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD74P04233 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD74P04233 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD74P04233 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.66■□□□□ 0.26
CD74P04233 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD74P04233 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.66■□□□□ 0.26
CD74P04233 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CD74P04233 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.65■□□□□ 0.26
CD74P04233 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD74P04233 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
CD74P04233 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD74P04233 AC007613.1-201ENST00000572811 2597 ntBASIC16.65■□□□□ 0.26
CD74P04233 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD74P04233 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD74P04233 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD74P04233 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD74P04233 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD74P04233 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD74P04233 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD74P04233 PGM5P4-201ENST00000421970 445 ntBASIC16.65■□□□□ 0.26
CD74P04233 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD74P04233 DUX4L2-201ENST00000561772 1275 ntBASIC16.65■□□□□ 0.26
CD74P04233 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
CD74P04233 DUX4L6-201ENST00000626483 1275 ntBASIC16.65■□□□□ 0.26
CD74P04233 DUX4L1-201ENST00000627662 1275 ntBASIC16.65■□□□□ 0.26
CD74P04233 DUX4L8-201ENST00000629013 1275 ntBASIC16.65■□□□□ 0.26
CD74P04233 DUX4L3-201ENST00000630187 1275 ntBASIC16.65■□□□□ 0.26
CD74P04233 DUX4L7-201ENST00000630678 1275 ntBASIC16.65■□□□□ 0.26
CD74P04233 DUX4L5-201ENST00000630834 1275 ntBASIC16.65■□□□□ 0.26
CD74P04233 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.65■□□□□ 0.26
CD74P04233 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.65■□□□□ 0.26
CD74P04233 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CD74P04233 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD74P04233 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD74P04233 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD74P04233 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD74P04233 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD74P04233 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CD74P04233 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.64■□□□□ 0.26
CD74P04233 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
CD74P04233 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD74P04233 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CD74P04233 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD74P04233 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD74P04233 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms