Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 CD99P1-205ENST00000527459 561 ntBASIC21.38■■□□□ 1.01
HLA-DRAP01903 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.38■■□□□ 1.01
HLA-DRAP01903 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.38■■□□□ 1.01
HLA-DRAP01903 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DRAP01903 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
HLA-DRAP01903 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.38■■□□□ 1.01
HLA-DRAP01903 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DRAP01903 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DRAP01903 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
HLA-DRAP01903 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
HLA-DRAP01903 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DRAP01903 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
HLA-DRAP01903 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DRAP01903 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.38■■□□□ 1.01
HLA-DRAP01903 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DRAP01903 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.38■■□□□ 1.01
HLA-DRAP01903 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
HLA-DRAP01903 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HLA-DRAP01903 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
HLA-DRAP01903 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HLA-DRAP01903 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HLA-DRAP01903 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.37■■□□□ 1.01
HLA-DRAP01903 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HLA-DRAP01903 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
HLA-DRAP01903 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.37■■□□□ 1.01
HLA-DRAP01903 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HLA-DRAP01903 AP003097.1-201ENST00000530657 1135 ntBASIC21.37■■□□□ 1.01
HLA-DRAP01903 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.37■■□□□ 1.01
HLA-DRAP01903 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HLA-DRAP01903 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.37■■□□□ 1.01
HLA-DRAP01903 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HLA-DRAP01903 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
HLA-DRAP01903 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.37■■□□□ 1.01
HLA-DRAP01903 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
HLA-DRAP01903 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
HLA-DRAP01903 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
HLA-DRAP01903 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HLA-DRAP01903 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
HLA-DRAP01903 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.36■■□□□ 1.01
HLA-DRAP01903 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DRAP01903 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DRAP01903 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DRAP01903 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.36■■□□□ 1.01
HLA-DRAP01903 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DRAP01903 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.36■■□□□ 1.01
HLA-DRAP01903 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.36■■□□□ 1.01
HLA-DRAP01903 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.36■■□□□ 1.01
HLA-DRAP01903 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.36■■□□□ 1.01
HLA-DRAP01903 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DRAP01903 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
HLA-DRAP01903 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.36■■□□□ 1.01
HLA-DRAP01903 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.36■■□□□ 1.01
HLA-DRAP01903 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.36■■□□□ 1.01
HLA-DRAP01903 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.36■■□□□ 1.01
HLA-DRAP01903 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.36■■□□□ 1.01
HLA-DRAP01903 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.36■■□□□ 1.01
HLA-DRAP01903 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
HLA-DRAP01903 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.36■■□□□ 1.01
HLA-DRAP01903 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.36■■□□□ 1.01
HLA-DRAP01903 TMEM179-206ENST00000616017 1645 ntBASIC21.36■■□□□ 1.01
HLA-DRAP01903 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.36■■□□□ 1.01
HLA-DRAP01903 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HLA-DRAP01903 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HLA-DRAP01903 AC018553.1-201ENST00000616682 1458 ntBASIC21.35■■□□□ 1.01
HLA-DRAP01903 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HLA-DRAP01903 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HLA-DRAP01903 MIR4651-201ENST00000582622 73 ntBASIC21.35■■□□□ 1.01
HLA-DRAP01903 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
HLA-DRAP01903 AC116351.2-201ENST00000606540 1585 ntBASIC21.35■■□□□ 1.01
HLA-DRAP01903 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
HLA-DRAP01903 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
HLA-DRAP01903 AFG3L1P-217ENST00000557444 2447 ntBASIC21.34■■□□□ 1.01
HLA-DRAP01903 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
HLA-DRAP01903 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HLA-DRAP01903 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
HLA-DRAP01903 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HLA-DRAP01903 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.34■■□□□ 1.01
HLA-DRAP01903 AC026366.1-201ENST00000488803 879 ntBASIC21.34■■□□□ 1.01
HLA-DRAP01903 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HLA-DRAP01903 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.34■■□□□ 1.01
HLA-DRAP01903 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.34■■□□□ 1.01
HLA-DRAP01903 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HLA-DRAP01903 AC009237.14-201ENST00000609975 1594 ntBASIC21.34■■□□□ 1.01
HLA-DRAP01903 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HLA-DRAP01903 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HLA-DRAP01903 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.34■■□□□ 1.01
HLA-DRAP01903 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.34■■□□□ 1.01
HLA-DRAP01903 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
HLA-DRAP01903 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.33■■□□□ 1.01
HLA-DRAP01903 AP001271.2-201ENST00000624018 1556 ntBASIC21.33■■□□□ 1.01
HLA-DRAP01903 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.33■■□□□ 1.01
HLA-DRAP01903 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HLA-DRAP01903 ESRRAP1-201ENST00000400596 1257 ntBASIC21.33■■□□□ 1.01
HLA-DRAP01903 POM121L13P-201ENST00000422362 380 ntBASIC21.33■■□□□ 1.01
HLA-DRAP01903 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.33■■□□□ 1.01
HLA-DRAP01903 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.33■■□□□ 1.01
HLA-DRAP01903 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.33■■□□□ 1.01
HLA-DRAP01903 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.33■■□□□ 1
HLA-DRAP01903 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
HLA-DRAP01903 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms