Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
GGPS1O95749 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
GGPS1O95749 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC22.32■■□□□ 1.16
GGPS1O95749 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC22.32■■□□□ 1.16
GGPS1O95749 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC22.32■■□□□ 1.16
GGPS1O95749 AP003071.4-201ENST00000562276 1284 ntBASIC22.32■■□□□ 1.16
GGPS1O95749 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
GGPS1O95749 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
GGPS1O95749 AC073195.1-201ENST00000607241 877 ntBASIC22.32■■□□□ 1.16
GGPS1O95749 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
GGPS1O95749 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
GGPS1O95749 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
GGPS1O95749 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
GGPS1O95749 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
GGPS1O95749 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
GGPS1O95749 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.32■■□□□ 1.16
GGPS1O95749 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
GGPS1O95749 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
GGPS1O95749 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.31■■□□□ 1.16
GGPS1O95749 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC22.31■■□□□ 1.16
GGPS1O95749 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC22.31■■□□□ 1.16
GGPS1O95749 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
GGPS1O95749 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
GGPS1O95749 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
GGPS1O95749 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
GGPS1O95749 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
GGPS1O95749 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
GGPS1O95749 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC22.31■■□□□ 1.16
GGPS1O95749 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC22.31■■□□□ 1.16
GGPS1O95749 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
GGPS1O95749 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
GGPS1O95749 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
GGPS1O95749 KRT16P6-202ENST00000425692 1426 ntBASIC22.31■■□□□ 1.16
GGPS1O95749 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC22.3■■□□□ 1.16
GGPS1O95749 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
GGPS1O95749 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC22.3■■□□□ 1.16
GGPS1O95749 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
GGPS1O95749 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
GGPS1O95749 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.3■■□□□ 1.16
GGPS1O95749 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
GGPS1O95749 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
GGPS1O95749 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
GGPS1O95749 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
GGPS1O95749 AL355355.2-201ENST00000442321 338 ntBASIC22.3■■□□□ 1.16
GGPS1O95749 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC22.3■■□□□ 1.16
GGPS1O95749 AP002982.1-201ENST00000492365 877 ntBASIC22.3■■□□□ 1.16
GGPS1O95749 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC22.3■■□□□ 1.16
GGPS1O95749 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC22.3■■□□□ 1.16
GGPS1O95749 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
GGPS1O95749 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC22.3■■□□□ 1.16
GGPS1O95749 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.3■■□□□ 1.16
GGPS1O95749 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
GGPS1O95749 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC22.3■■□□□ 1.16
GGPS1O95749 SRI-203ENST00000419179 1307 ntTSL 2 BASIC22.3■■□□□ 1.16
GGPS1O95749 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC22.3■■□□□ 1.16
GGPS1O95749 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC22.3■■□□□ 1.16
GGPS1O95749 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
GGPS1O95749 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC22.3■■□□□ 1.16
GGPS1O95749 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
GGPS1O95749 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
GGPS1O95749 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.29■■□□□ 1.16
GGPS1O95749 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
GGPS1O95749 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
GGPS1O95749 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
GGPS1O95749 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
GGPS1O95749 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
GGPS1O95749 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
GGPS1O95749 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC22.29■■□□□ 1.16
GGPS1O95749 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
GGPS1O95749 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
GGPS1O95749 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
GGPS1O95749 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
GGPS1O95749 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
GGPS1O95749 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
GGPS1O95749 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC22.29■■□□□ 1.16
GGPS1O95749 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC22.29■■□□□ 1.16
GGPS1O95749 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC22.29■■□□□ 1.16
GGPS1O95749 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC22.29■■□□□ 1.16
GGPS1O95749 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
GGPS1O95749 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
GGPS1O95749 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
GGPS1O95749 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC22.29■■□□□ 1.16
GGPS1O95749 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.29■■□□□ 1.16
GGPS1O95749 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
GGPS1O95749 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC22.29■■□□□ 1.16
GGPS1O95749 MED17-221ENST00000639724 2317 ntTSL 5 BASIC22.29■■□□□ 1.16
GGPS1O95749 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
GGPS1O95749 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
GGPS1O95749 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
GGPS1O95749 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
GGPS1O95749 SMG8-203ENST00000578922 2178 ntBASIC22.28■■□□□ 1.16
GGPS1O95749 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC22.28■■□□□ 1.16
GGPS1O95749 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
GGPS1O95749 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
GGPS1O95749 AC087499.1-201ENST00000418141 1075 ntBASIC22.28■■□□□ 1.16
GGPS1O95749 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
GGPS1O95749 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
GGPS1O95749 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
GGPS1O95749 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
GGPS1O95749 LINC01023-201ENST00000606054 436 ntBASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms