Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
GFRA3O60609 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GFRA3O60609 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
GFRA3O60609 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GFRA3O60609 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.41■□□□□ 0.7
GFRA3O60609 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GFRA3O60609 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GFRA3O60609 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GFRA3O60609 AP000523.1-201ENST00000398242 1049 ntBASIC19.41■□□□□ 0.7
GFRA3O60609 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
GFRA3O60609 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
GFRA3O60609 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.41■□□□□ 0.7
GFRA3O60609 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
GFRA3O60609 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.41■□□□□ 0.7
GFRA3O60609 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GFRA3O60609 LINC01711-201ENST00000598340 967 ntBASIC19.41■□□□□ 0.7
GFRA3O60609 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GFRA3O60609 AL355385.1-201ENST00000606123 409 ntBASIC19.41■□□□□ 0.7
GFRA3O60609 AL732292.2-201ENST00000609649 430 ntBASIC19.41■□□□□ 0.7
GFRA3O60609 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GFRA3O60609 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GFRA3O60609 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
GFRA3O60609 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GFRA3O60609 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GFRA3O60609 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GFRA3O60609 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
GFRA3O60609 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GFRA3O60609 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
GFRA3O60609 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GFRA3O60609 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
GFRA3O60609 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.4■□□□□ 0.7
GFRA3O60609 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GFRA3O60609 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GFRA3O60609 STARP1-201ENST00000397973 869 ntBASIC19.4■□□□□ 0.7
GFRA3O60609 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.4■□□□□ 0.7
GFRA3O60609 AL590627.1-203ENST00000421194 1026 ntBASIC19.4■□□□□ 0.7
GFRA3O60609 AC008040.2-201ENST00000461049 708 ntBASIC19.4■□□□□ 0.7
GFRA3O60609 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.4■□□□□ 0.7
GFRA3O60609 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.4■□□□□ 0.7
GFRA3O60609 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.4■□□□□ 0.7
GFRA3O60609 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GFRA3O60609 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GFRA3O60609 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.4■□□□□ 0.7
GFRA3O60609 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GFRA3O60609 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
GFRA3O60609 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
GFRA3O60609 AC010542.4-201ENST00000563151 1910 ntBASIC19.39■□□□□ 0.7
GFRA3O60609 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GFRA3O60609 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GFRA3O60609 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.39■□□□□ 0.69
GFRA3O60609 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GFRA3O60609 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
GFRA3O60609 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
GFRA3O60609 KRT18P1-202ENST00000452408 1331 ntBASIC19.39■□□□□ 0.69
GFRA3O60609 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
GFRA3O60609 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GFRA3O60609 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GFRA3O60609 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
GFRA3O60609 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GFRA3O60609 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GFRA3O60609 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.39■□□□□ 0.69
GFRA3O60609 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GFRA3O60609 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GFRA3O60609 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.38■□□□□ 0.69
GFRA3O60609 MIR574-201ENST00000385209 96 ntBASIC19.38■□□□□ 0.69
GFRA3O60609 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.38■□□□□ 0.69
GFRA3O60609 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
GFRA3O60609 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GFRA3O60609 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GFRA3O60609 MIR3180-1-201ENST00000580374 94 ntBASIC19.38■□□□□ 0.69
GFRA3O60609 MIR3180-3-201ENST00000584616 94 ntBASIC19.38■□□□□ 0.69
GFRA3O60609 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
GFRA3O60609 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.38■□□□□ 0.69
GFRA3O60609 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GFRA3O60609 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
GFRA3O60609 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GFRA3O60609 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GFRA3O60609 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GFRA3O60609 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GFRA3O60609 TSPY19P-201ENST00000418461 509 ntBASIC19.37■□□□□ 0.69
GFRA3O60609 AL645929.1-201ENST00000420084 975 ntBASIC19.37■□□□□ 0.69
GFRA3O60609 TSPY18P-201ENST00000441642 509 ntBASIC19.37■□□□□ 0.69
GFRA3O60609 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.37■□□□□ 0.69
GFRA3O60609 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GFRA3O60609 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.37■□□□□ 0.69
GFRA3O60609 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.37■□□□□ 0.69
GFRA3O60609 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.37■□□□□ 0.69
GFRA3O60609 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.37■□□□□ 0.69
GFRA3O60609 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
GFRA3O60609 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GFRA3O60609 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.37■□□□□ 0.69
GFRA3O60609 AF228730.7-201ENST00000641842 219 ntBASIC19.37■□□□□ 0.69
GFRA3O60609 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GFRA3O60609 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GFRA3O60609 AC026471.6-201ENST00000622954 1905 ntBASIC19.37■□□□□ 0.69
GFRA3O60609 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.37■□□□□ 0.69
GFRA3O60609 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.37■□□□□ 0.69
GFRA3O60609 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GFRA3O60609 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GFRA3O60609 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms