Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSX4O60224 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SSX4O60224 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.93■□□□□ 0.46
SSX4O60224 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.93■□□□□ 0.46
SSX4O60224 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSX4O60224 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SSX4O60224 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSX4O60224 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
SSX4O60224 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SSX4O60224 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SSX4O60224 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSX4O60224 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSX4O60224 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SSX4O60224 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SSX4O60224 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSX4O60224 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.93■□□□□ 0.46
SSX4O60224 AC069152.1-201ENST00000438030 544 ntBASIC17.93■□□□□ 0.46
SSX4O60224 EEF1DP3-203ENST00000566025 782 ntBASIC17.93■□□□□ 0.46
SSX4O60224 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SSX4O60224 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.93■□□□□ 0.46
SSX4O60224 AC053503.5-201ENST00000601508 636 ntBASIC17.93■□□□□ 0.46
SSX4O60224 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.93■□□□□ 0.46
SSX4O60224 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSX4O60224 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSX4O60224 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.93■□□□□ 0.46
SSX4O60224 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSX4O60224 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSX4O60224 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.93■□□□□ 0.46
SSX4O60224 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSX4O60224 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.92■□□□□ 0.46
SSX4O60224 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.92■□□□□ 0.46
SSX4O60224 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SSX4O60224 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSX4O60224 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.92■□□□□ 0.46
SSX4O60224 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.92■□□□□ 0.46
SSX4O60224 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSX4O60224 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSX4O60224 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSX4O60224 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
SSX4O60224 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.92■□□□□ 0.46
SSX4O60224 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSX4O60224 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.92■□□□□ 0.46
SSX4O60224 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SSX4O60224 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSX4O60224 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.92■□□□□ 0.46
SSX4O60224 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SSX4O60224 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
SSX4O60224 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SSX4O60224 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.92■□□□□ 0.46
SSX4O60224 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SSX4O60224 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SSX4O60224 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
SSX4O60224 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.92■□□□□ 0.46
SSX4O60224 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSX4O60224 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
SSX4O60224 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSX4O60224 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSX4O60224 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSX4O60224 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.91■□□□□ 0.46
SSX4O60224 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.91■□□□□ 0.46
SSX4O60224 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSX4O60224 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSX4O60224 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.91■□□□□ 0.46
SSX4O60224 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SSX4O60224 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSX4O60224 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.91■□□□□ 0.46
SSX4O60224 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SSX4O60224 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSX4O60224 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SSX4O60224 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.91■□□□□ 0.46
SSX4O60224 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SSX4O60224 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.91■□□□□ 0.46
SSX4O60224 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.91■□□□□ 0.46
SSX4O60224 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.91■□□□□ 0.46
SSX4O60224 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
SSX4O60224 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.91■□□□□ 0.46
SSX4O60224 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSX4O60224 AC120498.10-201ENST00000621827 505 ntBASIC17.91■□□□□ 0.46
SSX4O60224 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSX4O60224 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SSX4O60224 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSX4O60224 FZD10-202ENST00000539839 3282 ntBASIC17.91■□□□□ 0.46
SSX4O60224 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SSX4O60224 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSX4O60224 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SSX4O60224 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SSX4O60224 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.91■□□□□ 0.46
SSX4O60224 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.91■□□□□ 0.46
SSX4O60224 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.91■□□□□ 0.46
SSX4O60224 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSX4O60224 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
SSX4O60224 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SSX4O60224 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SSX4O60224 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
SSX4O60224 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSX4O60224 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.9■□□□□ 0.46
SSX4O60224 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.9■□□□□ 0.46
SSX4O60224 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SSX4O60224 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SSX4O60224 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms