Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KDELR3O43731 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
KDELR3O43731 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KDELR3O43731 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
KDELR3O43731 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.18■□□□□ 0.82
KDELR3O43731 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.18■□□□□ 0.82
KDELR3O43731 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
KDELR3O43731 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
KDELR3O43731 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KDELR3O43731 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KDELR3O43731 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
KDELR3O43731 AP001271.2-201ENST00000624018 1556 ntBASIC20.17■□□□□ 0.82
KDELR3O43731 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KDELR3O43731 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KDELR3O43731 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.17■□□□□ 0.82
KDELR3O43731 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
KDELR3O43731 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
KDELR3O43731 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.17■□□□□ 0.82
KDELR3O43731 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.17■□□□□ 0.82
KDELR3O43731 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.17■□□□□ 0.82
KDELR3O43731 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.17■□□□□ 0.82
KDELR3O43731 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
KDELR3O43731 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
KDELR3O43731 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.17■□□□□ 0.82
KDELR3O43731 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.17■□□□□ 0.82
KDELR3O43731 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KDELR3O43731 AC142381.4-202ENST00000563973 229 ntBASIC20.17■□□□□ 0.82
KDELR3O43731 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KDELR3O43731 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
KDELR3O43731 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
KDELR3O43731 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
KDELR3O43731 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
KDELR3O43731 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KDELR3O43731 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.17■□□□□ 0.82
KDELR3O43731 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KDELR3O43731 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KDELR3O43731 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
KDELR3O43731 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KDELR3O43731 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KDELR3O43731 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.16■□□□□ 0.82
KDELR3O43731 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.16■□□□□ 0.82
KDELR3O43731 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KDELR3O43731 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
KDELR3O43731 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
KDELR3O43731 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KDELR3O43731 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
KDELR3O43731 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KDELR3O43731 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KDELR3O43731 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.16■□□□□ 0.82
KDELR3O43731 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.16■□□□□ 0.82
KDELR3O43731 GCSHP5-201ENST00000443090 522 ntBASIC20.16■□□□□ 0.82
KDELR3O43731 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.16■□□□□ 0.82
KDELR3O43731 AC133681.1-201ENST00000465482 601 ntBASIC20.16■□□□□ 0.82
KDELR3O43731 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.16■□□□□ 0.82
KDELR3O43731 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.16■□□□□ 0.82
KDELR3O43731 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
KDELR3O43731 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
KDELR3O43731 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.16■□□□□ 0.82
KDELR3O43731 AL359736.2-201ENST00000621992 437 ntBASIC20.16■□□□□ 0.82
KDELR3O43731 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.16■□□□□ 0.82
KDELR3O43731 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
KDELR3O43731 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
KDELR3O43731 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KDELR3O43731 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
KDELR3O43731 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.15■□□□□ 0.82
KDELR3O43731 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
KDELR3O43731 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
KDELR3O43731 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
KDELR3O43731 AC239809.2-201ENST00000415381 517 ntBASIC20.15■□□□□ 0.82
KDELR3O43731 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
KDELR3O43731 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.15■□□□□ 0.82
KDELR3O43731 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.15■□□□□ 0.82
KDELR3O43731 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
KDELR3O43731 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.15■□□□□ 0.82
KDELR3O43731 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.15■□□□□ 0.82
KDELR3O43731 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.15■□□□□ 0.82
KDELR3O43731 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
KDELR3O43731 AC124016.1-201ENST00000609552 612 ntBASIC20.15■□□□□ 0.82
KDELR3O43731 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
KDELR3O43731 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KDELR3O43731 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
KDELR3O43731 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KDELR3O43731 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
KDELR3O43731 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
KDELR3O43731 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KDELR3O43731 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
KDELR3O43731 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
KDELR3O43731 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
KDELR3O43731 AC009237.14-201ENST00000609975 1594 ntBASIC20.14■□□□□ 0.81
KDELR3O43731 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.14■□□□□ 0.81
KDELR3O43731 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
KDELR3O43731 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
KDELR3O43731 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KDELR3O43731 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.14■□□□□ 0.81
KDELR3O43731 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
KDELR3O43731 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.14■□□□□ 0.81
KDELR3O43731 KRASP1-201ENST00000407852 552 ntBASIC20.14■□□□□ 0.81
KDELR3O43731 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KDELR3O43731 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.14■□□□□ 0.81
KDELR3O43731 AC112907.3-201ENST00000577781 2400 ntBASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms