Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.5■□□□□ 0.55
KPNA4O00629 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KPNA4O00629 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.5■□□□□ 0.55
KPNA4O00629 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.5■□□□□ 0.55
KPNA4O00629 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.5■□□□□ 0.55
KPNA4O00629 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.5■□□□□ 0.55
KPNA4O00629 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
KPNA4O00629 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KPNA4O00629 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
KPNA4O00629 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KPNA4O00629 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KPNA4O00629 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.5■□□□□ 0.55
KPNA4O00629 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KPNA4O00629 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.5■□□□□ 0.55
KPNA4O00629 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
KPNA4O00629 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
KPNA4O00629 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
KPNA4O00629 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.5■□□□□ 0.55
KPNA4O00629 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KPNA4O00629 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.49■□□□□ 0.55
KPNA4O00629 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.49■□□□□ 0.55
KPNA4O00629 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KPNA4O00629 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.49■□□□□ 0.55
KPNA4O00629 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KPNA4O00629 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KPNA4O00629 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KPNA4O00629 AC034268.1-201ENST00000441047 882 ntBASIC18.49■□□□□ 0.55
KPNA4O00629 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KPNA4O00629 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.49■□□□□ 0.55
KPNA4O00629 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.49■□□□□ 0.55
KPNA4O00629 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KPNA4O00629 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
KPNA4O00629 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
KPNA4O00629 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
KPNA4O00629 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
KPNA4O00629 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.49■□□□□ 0.55
KPNA4O00629 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KPNA4O00629 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KPNA4O00629 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.49■□□□□ 0.55
KPNA4O00629 AC120498.9-201ENST00000339021 3867 ntBASIC18.49■□□□□ 0.55
KPNA4O00629 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
KPNA4O00629 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
KPNA4O00629 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
KPNA4O00629 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.48■□□□□ 0.55
KPNA4O00629 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
KPNA4O00629 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
KPNA4O00629 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.48■□□□□ 0.55
KPNA4O00629 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.48■□□□□ 0.55
KPNA4O00629 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.48■□□□□ 0.55
KPNA4O00629 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KPNA4O00629 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
KPNA4O00629 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
KPNA4O00629 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KPNA4O00629 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
KPNA4O00629 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
KPNA4O00629 CDV3P1-201ENST00000471403 739 ntBASIC18.48■□□□□ 0.55
KPNA4O00629 AC087623.3-201ENST00000607047 1098 ntBASIC18.48■□□□□ 0.55
KPNA4O00629 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
KPNA4O00629 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.48■□□□□ 0.55
KPNA4O00629 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KPNA4O00629 HCG11-201ENST00000411553 5696 ntBASIC18.48■□□□□ 0.55
KPNA4O00629 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
KPNA4O00629 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KPNA4O00629 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
KPNA4O00629 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
KPNA4O00629 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KPNA4O00629 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KPNA4O00629 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
KPNA4O00629 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
KPNA4O00629 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
KPNA4O00629 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
KPNA4O00629 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
KPNA4O00629 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
KPNA4O00629 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
KPNA4O00629 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
KPNA4O00629 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
KPNA4O00629 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KPNA4O00629 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.47■□□□□ 0.55
KPNA4O00629 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KPNA4O00629 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KPNA4O00629 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.47■□□□□ 0.55
KPNA4O00629 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KPNA4O00629 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KPNA4O00629 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
KPNA4O00629 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.47■□□□□ 0.55
KPNA4O00629 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.47■□□□□ 0.55
KPNA4O00629 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.47■□□□□ 0.55
KPNA4O00629 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KPNA4O00629 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.47■□□□□ 0.55
KPNA4O00629 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KPNA4O00629 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
KPNA4O00629 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KPNA4O00629 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.47■□□□□ 0.55
KPNA4O00629 LTB4R2-202ENST00000528054 3092 ntBASIC18.47■□□□□ 0.55
KPNA4O00629 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KPNA4O00629 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.47■□□□□ 0.55
KPNA4O00629 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
KPNA4O00629 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KPNA4O00629 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
KPNA4O00629 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms