Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TAF4O00268 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.38■□□□□ 0.69
TAF4O00268 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TAF4O00268 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TAF4O00268 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.38■□□□□ 0.69
TAF4O00268 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.38■□□□□ 0.69
TAF4O00268 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TAF4O00268 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.38■□□□□ 0.69
TAF4O00268 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TAF4O00268 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TAF4O00268 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.38■□□□□ 0.69
TAF4O00268 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
TAF4O00268 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
TAF4O00268 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.38■□□□□ 0.69
TAF4O00268 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.38■□□□□ 0.69
TAF4O00268 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TAF4O00268 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TAF4O00268 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
TAF4O00268 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TAF4O00268 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.38■□□□□ 0.69
TAF4O00268 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.37■□□□□ 0.69
TAF4O00268 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TAF4O00268 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TAF4O00268 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.37■□□□□ 0.69
TAF4O00268 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TAF4O00268 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TAF4O00268 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TAF4O00268 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TAF4O00268 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TAF4O00268 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.37■□□□□ 0.69
TAF4O00268 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TAF4O00268 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.37■□□□□ 0.69
TAF4O00268 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.37■□□□□ 0.69
TAF4O00268 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TAF4O00268 RBM17P1-201ENST00000453646 1190 ntBASIC19.37■□□□□ 0.69
TAF4O00268 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.37■□□□□ 0.69
TAF4O00268 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TAF4O00268 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.37■□□□□ 0.69
TAF4O00268 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.37■□□□□ 0.69
TAF4O00268 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.37■□□□□ 0.69
TAF4O00268 WWOX-216ENST00000569818 525 ntBASIC19.37■□□□□ 0.69
TAF4O00268 AF186192.3-201ENST00000583427 947 ntBASIC19.37■□□□□ 0.69
TAF4O00268 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TAF4O00268 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TAF4O00268 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TAF4O00268 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TAF4O00268 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.37■□□□□ 0.69
TAF4O00268 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TAF4O00268 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.37■□□□□ 0.69
TAF4O00268 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TAF4O00268 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TAF4O00268 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.36■□□□□ 0.69
TAF4O00268 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.36■□□□□ 0.69
TAF4O00268 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TAF4O00268 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.36■□□□□ 0.69
TAF4O00268 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TAF4O00268 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TAF4O00268 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.36■□□□□ 0.69
TAF4O00268 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.36■□□□□ 0.69
TAF4O00268 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.36■□□□□ 0.69
TAF4O00268 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.36■□□□□ 0.69
TAF4O00268 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
TAF4O00268 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TAF4O00268 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
TAF4O00268 AC105020.6-201ENST00000621523 1217 ntBASIC19.36■□□□□ 0.69
TAF4O00268 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TAF4O00268 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.36■□□□□ 0.69
TAF4O00268 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TAF4O00268 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TAF4O00268 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TAF4O00268 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TAF4O00268 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TAF4O00268 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TAF4O00268 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TAF4O00268 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.35■□□□□ 0.69
TAF4O00268 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TAF4O00268 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TAF4O00268 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TAF4O00268 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TAF4O00268 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TAF4O00268 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.35■□□□□ 0.69
TAF4O00268 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.35■□□□□ 0.69
TAF4O00268 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.35■□□□□ 0.69
TAF4O00268 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TAF4O00268 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.35■□□□□ 0.69
TAF4O00268 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TAF4O00268 AC245052.3-201ENST00000450182 901 ntBASIC19.35■□□□□ 0.69
TAF4O00268 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.35■□□□□ 0.69
TAF4O00268 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TAF4O00268 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.35■□□□□ 0.69
TAF4O00268 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.35■□□□□ 0.69
TAF4O00268 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TAF4O00268 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TAF4O00268 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TAF4O00268 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TAF4O00268 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TAF4O00268 CYP21A1P-202ENST00000354927 1481 ntBASIC19.35■□□□□ 0.69
TAF4O00268 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TAF4O00268 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TAF4O00268 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms