Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 MIR4785-201ENST00000585005 73 ntBASIC19.47■□□□□ 0.71
TMX2-CTNND1H3BSU7 AC006557.6-201ENST00000623071 864 ntBASIC19.47■□□□□ 0.71
TMX2-CTNND1H3BSU7 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.47■□□□□ 0.71
TMX2-CTNND1H3BSU7 AL049637.2-201ENST00000641778 930 ntBASIC19.47■□□□□ 0.71
TMX2-CTNND1H3BSU7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TMX2-CTNND1H3BSU7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TMX2-CTNND1H3BSU7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMX2-CTNND1H3BSU7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMX2-CTNND1H3BSU7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TMX2-CTNND1H3BSU7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.47■□□□□ 0.71
TMX2-CTNND1H3BSU7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMX2-CTNND1H3BSU7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMX2-CTNND1H3BSU7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMX2-CTNND1H3BSU7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMX2-CTNND1H3BSU7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TMX2-CTNND1H3BSU7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMX2-CTNND1H3BSU7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.46■□□□□ 0.71
TMX2-CTNND1H3BSU7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMX2-CTNND1H3BSU7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.46■□□□□ 0.71
TMX2-CTNND1H3BSU7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.46■□□□□ 0.71
TMX2-CTNND1H3BSU7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMX2-CTNND1H3BSU7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TMX2-CTNND1H3BSU7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TMX2-CTNND1H3BSU7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TMX2-CTNND1H3BSU7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
TMX2-CTNND1H3BSU7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TMX2-CTNND1H3BSU7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMX2-CTNND1H3BSU7 KRASP1-201ENST00000407852 552 ntBASIC19.46■□□□□ 0.71
TMX2-CTNND1H3BSU7 ECEL1P3-201ENST00000427961 737 ntBASIC19.46■□□□□ 0.71
TMX2-CTNND1H3BSU7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
TMX2-CTNND1H3BSU7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TMX2-CTNND1H3BSU7 RARRES2P10-201ENST00000564312 460 ntBASIC19.46■□□□□ 0.71
TMX2-CTNND1H3BSU7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TMX2-CTNND1H3BSU7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TMX2-CTNND1H3BSU7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TMX2-CTNND1H3BSU7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMX2-CTNND1H3BSU7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.46■□□□□ 0.71
TMX2-CTNND1H3BSU7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TMX2-CTNND1H3BSU7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMX2-CTNND1H3BSU7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMX2-CTNND1H3BSU7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.45■□□□□ 0.7
TMX2-CTNND1H3BSU7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TMX2-CTNND1H3BSU7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMX2-CTNND1H3BSU7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TMX2-CTNND1H3BSU7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TMX2-CTNND1H3BSU7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TMX2-CTNND1H3BSU7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TMX2-CTNND1H3BSU7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.45■□□□□ 0.7
TMX2-CTNND1H3BSU7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.45■□□□□ 0.7
TMX2-CTNND1H3BSU7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.45■□□□□ 0.7
TMX2-CTNND1H3BSU7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TMX2-CTNND1H3BSU7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMX2-CTNND1H3BSU7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TMX2-CTNND1H3BSU7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.45■□□□□ 0.7
TMX2-CTNND1H3BSU7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.45■□□□□ 0.7
TMX2-CTNND1H3BSU7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMX2-CTNND1H3BSU7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMX2-CTNND1H3BSU7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TMX2-CTNND1H3BSU7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMX2-CTNND1H3BSU7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TMX2-CTNND1H3BSU7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 FAM210CP-201ENST00000445714 574 ntBASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 BX088651.1-201ENST00000540551 451 ntBASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TMX2-CTNND1H3BSU7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMX2-CTNND1H3BSU7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMX2-CTNND1H3BSU7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.43■□□□□ 0.7
TMX2-CTNND1H3BSU7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.43■□□□□ 0.7
TMX2-CTNND1H3BSU7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms