Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MBD3L3A6NE82 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MBD3L3A6NE82 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.51■□□□□ 0.39
MBD3L3A6NE82 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MBD3L3A6NE82 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.5■□□□□ 0.39
MBD3L3A6NE82 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MBD3L3A6NE82 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MBD3L3A6NE82 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.5■□□□□ 0.39
MBD3L3A6NE82 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MBD3L3A6NE82 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.5■□□□□ 0.39
MBD3L3A6NE82 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
MBD3L3A6NE82 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MBD3L3A6NE82 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.5■□□□□ 0.39
MBD3L3A6NE82 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.5■□□□□ 0.39
MBD3L3A6NE82 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MBD3L3A6NE82 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.5■□□□□ 0.39
MBD3L3A6NE82 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.5■□□□□ 0.39
MBD3L3A6NE82 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MBD3L3A6NE82 CR392000.1-201ENST00000624770 1228 ntBASIC17.5■□□□□ 0.39
MBD3L3A6NE82 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MBD3L3A6NE82 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.5■□□□□ 0.39
MBD3L3A6NE82 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
MBD3L3A6NE82 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
MBD3L3A6NE82 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MBD3L3A6NE82 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.49■□□□□ 0.39
MBD3L3A6NE82 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.49■□□□□ 0.39
MBD3L3A6NE82 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
MBD3L3A6NE82 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.49■□□□□ 0.39
MBD3L3A6NE82 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MBD3L3A6NE82 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.49■□□□□ 0.39
MBD3L3A6NE82 TUBB8P6-201ENST00000436895 1288 ntBASIC17.49■□□□□ 0.39
MBD3L3A6NE82 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MBD3L3A6NE82 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.49■□□□□ 0.39
MBD3L3A6NE82 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.49■□□□□ 0.39
MBD3L3A6NE82 REXO1L10P-201ENST00000615707 1290 ntBASIC17.49■□□□□ 0.39
MBD3L3A6NE82 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.49■□□□□ 0.39
MBD3L3A6NE82 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.49■□□□□ 0.39
MBD3L3A6NE82 AC133561.5-201ENST00000635547 218 ntBASIC17.49■□□□□ 0.39
MBD3L3A6NE82 AC097493.4-201ENST00000641197 219 ntBASIC17.49■□□□□ 0.39
MBD3L3A6NE82 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.49■□□□□ 0.39
MBD3L3A6NE82 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MBD3L3A6NE82 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MBD3L3A6NE82 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.49■□□□□ 0.39
MBD3L3A6NE82 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MBD3L3A6NE82 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MBD3L3A6NE82 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MBD3L3A6NE82 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MBD3L3A6NE82 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
MBD3L3A6NE82 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
MBD3L3A6NE82 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.49■□□□□ 0.39
MBD3L3A6NE82 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MBD3L3A6NE82 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
MBD3L3A6NE82 BX119927.1-201ENST00000636596 1552 ntBASIC17.49■□□□□ 0.39
MBD3L3A6NE82 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MBD3L3A6NE82 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
MBD3L3A6NE82 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
MBD3L3A6NE82 MMP23A-201ENST00000234610 1017 ntBASIC17.48■□□□□ 0.39
MBD3L3A6NE82 RBM17P1-201ENST00000453646 1190 ntBASIC17.48■□□□□ 0.39
MBD3L3A6NE82 AC116562.2-201ENST00000507042 360 ntBASIC17.48■□□□□ 0.39
MBD3L3A6NE82 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.48■□□□□ 0.39
MBD3L3A6NE82 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.48■□□□□ 0.39
MBD3L3A6NE82 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.48■□□□□ 0.39
MBD3L3A6NE82 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.48■□□□□ 0.39
MBD3L3A6NE82 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MBD3L3A6NE82 AC012306.2-201ENST00000609350 630 ntBASIC17.48■□□□□ 0.39
MBD3L3A6NE82 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MBD3L3A6NE82 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MBD3L3A6NE82 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MBD3L3A6NE82 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.48■□□□□ 0.39
MBD3L3A6NE82 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD3L3A6NE82 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD3L3A6NE82 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
MBD3L3A6NE82 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
MBD3L3A6NE82 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
MBD3L3A6NE82 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD3L3A6NE82 UNC93B2-201ENST00000285383 730 ntBASIC17.47■□□□□ 0.39
MBD3L3A6NE82 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.47■□□□□ 0.39
MBD3L3A6NE82 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.47■□□□□ 0.39
MBD3L3A6NE82 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD3L3A6NE82 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.47■□□□□ 0.39
MBD3L3A6NE82 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MBD3L3A6NE82 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD3L3A6NE82 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
MBD3L3A6NE82 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.47■□□□□ 0.39
MBD3L3A6NE82 AL445675.2-201ENST00000620291 557 ntBASIC17.47■□□□□ 0.39
MBD3L3A6NE82 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD3L3A6NE82 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MBD3L3A6NE82 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD3L3A6NE82 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD3L3A6NE82 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.47■□□□□ 0.39
MBD3L3A6NE82 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD3L3A6NE82 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD3L3A6NE82 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
MBD3L3A6NE82 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
MBD3L3A6NE82 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MBD3L3A6NE82 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MBD3L3A6NE82 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.46■□□□□ 0.39
MBD3L3A6NE82 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MBD3L3A6NE82 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
MBD3L3A6NE82 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms