Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
TRAV13-2A0A0B4J235 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV13-2A0A0B4J235 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAV13-2A0A0B4J235 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAV13-2A0A0B4J235 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAV13-2A0A0B4J235 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAV13-2A0A0B4J235 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TRAV13-2A0A0B4J235 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAV13-2A0A0B4J235 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TRAV13-2A0A0B4J235 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV13-2A0A0B4J235 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV13-2A0A0B4J235 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV13-2A0A0B4J235 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRAV13-2A0A0B4J235 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV13-2A0A0B4J235 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV13-2A0A0B4J235 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV13-2A0A0B4J235 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV13-2A0A0B4J235 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC13.11□□□□□ -0.31
TRAV13-2A0A0B4J235 AC007613.1-201ENST00000572811 2597 ntBASIC13.11□□□□□ -0.31
TRAV13-2A0A0B4J235 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV13-2A0A0B4J235 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV13-2A0A0B4J235 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 AL049812.1-201ENST00000432563 2267 ntBASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 CD37-204ENST00000535669 1674 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 AC004987.1-201ENST00000428627 508 ntBASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 KRT125P-201ENST00000546827 989 ntBASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 MIR3181-201ENST00000578512 73 ntBASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
TRAV13-2A0A0B4J235 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TRAV13-2A0A0B4J235 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV13-2A0A0B4J235 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV13-2A0A0B4J235 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV13-2A0A0B4J235 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV13-2A0A0B4J235 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV13-2A0A0B4J235 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV13-2A0A0B4J235 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TRAV13-2A0A0B4J235 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV13-2A0A0B4J235 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV13-2A0A0B4J235 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC13.09□□□□□ -0.31
TRAV13-2A0A0B4J235 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV13-2A0A0B4J235 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV13-2A0A0B4J235 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC13.09□□□□□ -0.31
TRAV13-2A0A0B4J235 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
TRAV13-2A0A0B4J235 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV13-2A0A0B4J235 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
TRAV13-2A0A0B4J235 AC010525.1-201ENST00000585559 441 ntBASIC13.09□□□□□ -0.31
TRAV13-2A0A0B4J235 AC010997.5-201ENST00000609182 354 ntBASIC13.09□□□□□ -0.31
TRAV13-2A0A0B4J235 STK25-205ENST00000405883 1904 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAV13-2A0A0B4J235 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV13-2A0A0B4J235 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAV13-2A0A0B4J235 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC13.09□□□□□ -0.31
TRAV13-2A0A0B4J235 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
TRAV13-2A0A0B4J235 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV13-2A0A0B4J235 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAV13-2A0A0B4J235 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV13-2A0A0B4J235 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC13.09□□□□□ -0.31
TRAV13-2A0A0B4J235 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAV13-2A0A0B4J235 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC13.08□□□□□ -0.31
TRAV13-2A0A0B4J235 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
TRAV13-2A0A0B4J235 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
TRAV13-2A0A0B4J235 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC13.08□□□□□ -0.31
TRAV13-2A0A0B4J235 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
TRAV13-2A0A0B4J235 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV13-2A0A0B4J235 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV13-2A0A0B4J235 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms