Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 LINC01521-201ENST00000504184 1943 ntBASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 AL138781.1-201ENST00000566567 1274 ntBASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 MIR4758-201ENST00000577688 71 ntBASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 AL356652.1-201ENST00000615962 565 ntBASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 GAMT-205ENST00000640762 751 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 GCK-205ENST00000437084 1385 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 KRT17P1-201ENST00000399211 1546 ntBASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 MIR2861-201ENST00000636310 90 ntBASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV26-1A0A087WT03 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV26-1A0A087WT03 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRAV26-1A0A087WT03 AC007225.1-201ENST00000566331 1836 ntBASIC14.29□□□□□ -0.12
TRAV26-1A0A087WT03 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
TRAV26-1A0A087WT03 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV26-1A0A087WT03 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRAV26-1A0A087WT03 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV26-1A0A087WT03 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV26-1A0A087WT03 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV26-1A0A087WT03 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRAV26-1A0A087WT03 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV26-1A0A087WT03 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
TRAV26-1A0A087WT03 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV26-1A0A087WT03 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRAV26-1A0A087WT03 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAV26-1A0A087WT03 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAV26-1A0A087WT03 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC14.29□□□□□ -0.12
TRAV26-1A0A087WT03 AC092118.2-201ENST00000613495 667 ntBASIC14.29□□□□□ -0.12
TRAV26-1A0A087WT03 AC105020.6-201ENST00000621523 1217 ntBASIC14.29□□□□□ -0.12
TRAV26-1A0A087WT03 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAV26-1A0A087WT03 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
TRAV26-1A0A087WT03 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRAV26-1A0A087WT03 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV26-1A0A087WT03 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms