Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TRAV9-1A0A075B6T8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAV9-1A0A075B6T8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV9-1A0A075B6T8 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV9-1A0A075B6T8 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TRAV9-1A0A075B6T8 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV9-1A0A075B6T8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV9-1A0A075B6T8 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV9-1A0A075B6T8 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TRAV9-1A0A075B6T8 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TRAV9-1A0A075B6T8 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV9-1A0A075B6T8 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV9-1A0A075B6T8 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV9-1A0A075B6T8 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 MOK-225ENST00000522867 1883 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 WIZP1-201ENST00000531444 2299 ntBASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TRAV9-1A0A075B6T8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 Z98044.1-201ENST00000632503 1764 ntBASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 AC021242.3-201ENST00000607598 1377 ntBASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 AC006333.2-201ENST00000607957 2099 ntBASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 MIR4508-201ENST00000584178 70 ntBASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 AC093525.10-201ENST00000625130 1569 ntBASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV9-1A0A075B6T8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV9-1A0A075B6T8 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV9-1A0A075B6T8 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV9-1A0A075B6T8 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV9-1A0A075B6T8 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TRAV9-1A0A075B6T8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV9-1A0A075B6T8 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV9-1A0A075B6T8 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV9-1A0A075B6T8 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV9-1A0A075B6T8 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV9-1A0A075B6T8 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRAV9-1A0A075B6T8 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV9-1A0A075B6T8 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV9-1A0A075B6T8 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms