Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 RN7SKP130-201ENST00000364924 301 ntBASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 NOX1-203ENST00000372964 661 ntTSL 2 BASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 AL050305.1-201ENST00000399993 1230 ntBASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 RPS7P12-201ENST00000422385 582 ntBASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 AC009303.1-201ENST00000426307 352 ntBASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 RPS10P21-201ENST00000430654 475 ntBASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 NPM1P48-201ENST00000436002 853 ntBASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 RPL36AP55-201ENST00000454114 305 ntBASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 HNRNPRP2-201ENST00000528421 743 ntBASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 SLC25A51P2-201ENST00000535708 889 ntBASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 AC006518.1-201ENST00000541449 943 ntBASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 AC089984.3-201ENST00000552838 363 ntBASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 MIR5095-201ENST00000578844 88 ntBASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 MIR378H-201ENST00000579966 83 ntBASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 AL078624.2-201ENST00000605063 554 ntBASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 PTCHD3P1-201ENST00000612350 537 ntBASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 AC073862.4-201ENST00000622982 854 ntBASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC7.56□□□□□ -1.2
CDK5RAP3Q96JB5 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 AC105114.1-201ENST00000624795 1862 ntBASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 MAPK10-344ENST00000641718 3746 ntBASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 RNA5SP442-201ENST00000365050 107 ntBASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 DHFRP5-201ENST00000406944 564 ntBASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 RPL18AP14-201ENST00000417685 526 ntBASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 AL672212.1-201ENST00000422246 400 ntBASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 EIF4A1P5-201ENST00000428062 1095 ntBASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 AC011742.2-201ENST00000443818 352 ntBASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 AL500527.1-201ENST00000448532 255 ntBASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 AC009244.1-201ENST00000450566 258 ntBASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 AP002371.1-201ENST00000463604 433 ntBASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 RN7SL561P-201ENST00000488553 281 ntBASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 AC112184.1-201ENST00000505179 312 ntBASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 AC023080.1-201ENST00000551663 931 ntBASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 OR7E19P-202ENST00000589942 844 ntBASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 KATNBL1P1-201ENST00000605192 748 ntBASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 RPL21P136-201ENST00000605378 396 ntBASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 SNORA35B-201ENST00000607417 129 ntBASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 AP005131.7-201ENST00000610087 611 ntBASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 AC006328.2-201ENST00000623198 397 ntBASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 AC012005.2-201ENST00000624333 397 ntBASIC7.55□□□□□ -1.2
CDK5RAP3Q96JB5 AP000577.1-201ENST00000624366 878 ntBASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms