Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 AP001094.1-201ENST00000579805 193 ntBASIC7.57□□□□□ -1.2
PHC3Q8NDX5 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 AC243960.3-201ENST00000599316 580 ntTSL 4 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 AL360219.1-201ENST00000610230 366 ntBASIC7.57□□□□□ -1.2
PHC3Q8NDX5 AC022106.1-201ENST00000612834 766 ntBASIC7.57□□□□□ -1.2
PHC3Q8NDX5 AC244196.3-201ENST00000614171 374 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 AL359513.1-201ENST00000614364 557 ntBASIC7.57□□□□□ -1.2
PHC3Q8NDX5 AL391903.2-201ENST00000614532 247 ntBASIC7.57□□□□□ -1.2
PHC3Q8NDX5 CT45A9-202ENST00000620704 1010 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 TSHZ2-205ENST00000626626 670 ntBASIC7.57□□□□□ -1.2
PHC3Q8NDX5 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 MAPK10-287ENST00000641217 3037 ntBASIC7.57□□□□□ -1.2
PHC3Q8NDX5 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PHC3Q8NDX5 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 AC027279.1-201ENST00000568885 4284 ntBASIC7.56□□□□□ -1.2
PHC3Q8NDX5 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 AC007938.1-201ENST00000562524 2902 ntBASIC7.56□□□□□ -1.2
PHC3Q8NDX5 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 AC007406.5-201ENST00000570140 3170 ntBASIC7.56□□□□□ -1.2
PHC3Q8NDX5 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 MBD3L1-201ENST00000305625 748 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 BMS1P3-201ENST00000372011 932 ntBASIC7.56□□□□□ -1.2
PHC3Q8NDX5 LST1-211ENST00000376110 433 ntTSL 3 BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 SSX9-201ENST00000376909 591 ntBASIC7.56□□□□□ -1.2
PHC3Q8NDX5 MIR181C-201ENST00000384881 110 ntBASIC7.56□□□□□ -1.2
PHC3Q8NDX5 Y_RNA.578-201ENST00000390903 88 ntBASIC7.56□□□□□ -1.2
PHC3Q8NDX5 RNA5SP18-201ENST00000390935 121 ntBASIC7.56□□□□□ -1.2
PHC3Q8NDX5 RNA5SP297-201ENST00000391029 113 ntBASIC7.56□□□□□ -1.2
PHC3Q8NDX5 SFR1P1-201ENST00000403720 688 ntBASIC7.56□□□□□ -1.2
PHC3Q8NDX5 RN7SKP207-201ENST00000411204 303 ntBASIC7.56□□□□□ -1.2
PHC3Q8NDX5 ETFBKMT-203ENST00000412352 1083 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 AL133217.1-201ENST00000450980 425 ntBASIC7.56□□□□□ -1.2
PHC3Q8NDX5 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 AC005410.1-202ENST00000460347 485 ntBASIC7.56□□□□□ -1.2
PHC3Q8NDX5 RN7SL414P-201ENST00000469545 294 ntBASIC7.56□□□□□ -1.2
PHC3Q8NDX5 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 OR2A20P-203ENST00000498397 1268 ntBASIC7.56□□□□□ -1.2
PHC3Q8NDX5 AC233724.1-201ENST00000503894 233 ntBASIC7.56□□□□□ -1.2
PHC3Q8NDX5 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 AC109811.2-201ENST00000509609 452 ntBASIC7.56□□□□□ -1.2
PHC3Q8NDX5 OR5BM1P-201ENST00000512021 366 ntBASIC7.56□□□□□ -1.2
PHC3Q8NDX5 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 AP003385.2-201ENST00000524910 973 ntBASIC7.56□□□□□ -1.2
PHC3Q8NDX5 NUTF2P2-201ENST00000551207 384 ntBASIC7.56□□□□□ -1.2
PHC3Q8NDX5 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 OR4C49P-201ENST00000563891 900 ntBASIC7.56□□□□□ -1.2
PHC3Q8NDX5 AC027796.5-201ENST00000573568 560 ntTSL 5 BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 RN7SL786P-201ENST00000579130 298 ntBASIC7.56□□□□□ -1.2
PHC3Q8NDX5 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 MIR4437-201ENST00000581331 60 ntBASIC7.56□□□□□ -1.2
PHC3Q8NDX5 MIR4642-201ENST00000583943 82 ntBASIC7.56□□□□□ -1.2
PHC3Q8NDX5 AL137190.1-201ENST00000603288 282 ntBASIC7.56□□□□□ -1.2
PHC3Q8NDX5 AC015722.2-201ENST00000622210 551 ntBASIC7.56□□□□□ -1.2
PHC3Q8NDX5 AC137056.2-201ENST00000624055 1958 ntBASIC7.56□□□□□ -1.2
PHC3Q8NDX5 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.56□□□□□ -1.2
PHC3Q8NDX5 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms