Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 CDY5P-201ENST00000411487 1580 ntBASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 CDY9P-201ENST00000451397 1580 ntBASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 RNA5SP302-201ENST00000364896 100 ntBASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 RGS5-202ENST00000367903 934 ntTSL 3 BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 RNU6-1055P-201ENST00000391085 107 ntBASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 AL139100.1-201ENST00000408001 498 ntBASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 RN7SKP137-201ENST00000411074 307 ntBASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 AC024937.2-201ENST00000411669 1242 ntBASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 TMA16P2-201ENST00000413187 601 ntBASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 GAS5-211ENST00000432536 959 ntTSL 2 BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 AL592114.2-201ENST00000440142 532 ntBASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 RPS10P14-201ENST00000440748 502 ntBASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 AC009237.4-201ENST00000441078 238 ntBASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 DBIL5P2-201ENST00000443827 253 ntBASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 PABPC1P10-201ENST00000464731 381 ntBASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 CBX5P1-201ENST00000468470 561 ntBASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 RPL23P10-201ENST00000468780 412 ntBASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 HMGB1P38-201ENST00000490557 577 ntBASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 TECRP2-201ENST00000503270 928 ntBASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 AC121161.1-201ENST00000510606 652 ntBASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 AP001646.2-201ENST00000528645 1156 ntBASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 OR4U1P-201ENST00000554958 912 ntBASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 HNRNPA1P71-201ENST00000559135 950 ntBASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 AC145350.1-201ENST00000567426 208 ntBASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 FCGR1CP-201ENST00000579737 1127 ntBASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 PRR13P5-201ENST00000596581 442 ntBASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 AL160237.3-201ENST00000604114 1013 ntBASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 AL022161.1-201ENST00000604390 213 ntBASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 AL078624.2-201ENST00000605063 554 ntBASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 AC080013.6-201ENST00000606185 215 ntBASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 AC016542.3-201ENST00000623520 619 ntBASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 AC138915.4-201ENST00000565549 4147 ntBASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 AL132656.3-201ENST00000606384 1595 ntBASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.03□□□□□ -1.28
TRIM48Q8IWZ4 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
TRIM48Q8IWZ4 EEF1A1P28-201ENST00000450915 1403 ntBASIC7.02□□□□□ -1.29
TRIM48Q8IWZ4 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC7.02□□□□□ -1.29
TRIM48Q8IWZ4 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TRIM48Q8IWZ4 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
TRIM48Q8IWZ4 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
TRIM48Q8IWZ4 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TRIM48Q8IWZ4 AC011447.6-201ENST00000623510 2598 ntBASIC7.02□□□□□ -1.29
TRIM48Q8IWZ4 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.02□□□□□ -1.29
TRIM48Q8IWZ4 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
TRIM48Q8IWZ4 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TRIM48Q8IWZ4 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
TRIM48Q8IWZ4 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TRIM48Q8IWZ4 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TRIM48Q8IWZ4 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TRIM48Q8IWZ4 RNU6-298P-201ENST00000390888 96 ntBASIC7.02□□□□□ -1.29
TRIM48Q8IWZ4 RPL24P7-201ENST00000399435 453 ntBASIC7.02□□□□□ -1.29
TRIM48Q8IWZ4 LARP1P1-201ENST00000407692 292 ntBASIC7.02□□□□□ -1.29
TRIM48Q8IWZ4 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC7.02□□□□□ -1.29
TRIM48Q8IWZ4 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC7.02□□□□□ -1.29
TRIM48Q8IWZ4 MICG-208ENST00000416822 132 ntBASIC7.02□□□□□ -1.29
TRIM48Q8IWZ4 NIFKP3-201ENST00000417799 865 ntBASIC7.02□□□□□ -1.29
TRIM48Q8IWZ4 PPIAP23-201ENST00000420099 497 ntBASIC7.02□□□□□ -1.29
TRIM48Q8IWZ4 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.02□□□□□ -1.29
TRIM48Q8IWZ4 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms