Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AP004609.2-201ENST00000532177 190 ntBASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 AL162632.2-201ENST00000553933 399 ntBASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 AC090826.1-203ENST00000569235 490 ntBASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 AL589863.1-201ENST00000595383 631 ntBASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 SNORD91A-202ENST00000609620 191 ntBASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 AC025262.3-201ENST00000623666 360 ntBASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 ASNSP6-201ENST00000592770 1618 ntBASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SHROOM1Q2M3G4 AL589993.1-201ENST00000407450 2524 ntBASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 AL596244.1-201ENST00000567068 3779 ntBASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 MORF4L1P5-201ENST00000433352 961 ntBASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 AMYP1-201ENST00000440059 1023 ntBASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 AC036111.2-201ENST00000533247 901 ntBASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 AC090115.2-201ENST00000548060 883 ntBASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 TPRX1P1-201ENST00000557620 319 ntBASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 AC010333.3-201ENST00000615100 402 ntBASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 MRPL57P1-201ENST00000621486 265 ntBASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 AKAP17BP-201ENST00000431706 2719 ntBASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 AL353743.3-201ENST00000442109 1468 ntBASIC7.62□□□□□ -1.19
SHROOM1Q2M3G4 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 AC107980.1-201ENST00000558671 3355 ntBASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 AC009500.1-201ENST00000420684 583 ntBASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 AC094019.1-201ENST00000434678 472 ntBASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 AC026826.1-201ENST00000493002 361 ntBASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 RPL5P11-201ENST00000498068 893 ntBASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 SNX18P25-201ENST00000510539 758 ntBASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 OR9L1P-201ENST00000529493 933 ntBASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 TRIM51DP-201ENST00000529746 596 ntBASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 NDUFA5P11-201ENST00000567995 343 ntBASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 AL078623.1-201ENST00000602702 907 ntBASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 BUB1P1-201ENST00000603541 607 ntBASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 AL365181.4-201ENST00000609800 547 ntBASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SHROOM1Q2M3G4 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms