Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC6.39□□□□□ -1.39
NKX6-1P78426 PSMD8P1-201ENST00000436275 769 ntBASIC6.39□□□□□ -1.39
NKX6-1P78426 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC6.39□□□□□ -1.39
NKX6-1P78426 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC6.39□□□□□ -1.39
NKX6-1P78426 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC6.39□□□□□ -1.39
NKX6-1P78426 RNFT1P2-201ENST00000443064 757 ntBASIC6.39□□□□□ -1.39
NKX6-1P78426 MTND6P5-201ENST00000448266 512 ntBASIC6.39□□□□□ -1.39
NKX6-1P78426 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.39□□□□□ -1.39
NKX6-1P78426 RHEBP1-201ENST00000448647 556 ntBASIC6.39□□□□□ -1.39
NKX6-1P78426 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.39□□□□□ -1.39
NKX6-1P78426 OFD1P3Y-201ENST00000453312 783 ntBASIC6.39□□□□□ -1.39
NKX6-1P78426 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.39□□□□□ -1.39
NKX6-1P78426 SETP6-201ENST00000479329 568 ntBASIC6.39□□□□□ -1.39
NKX6-1P78426 PPM1AP1-201ENST00000502740 1135 ntBASIC6.39□□□□□ -1.39
NKX6-1P78426 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.39□□□□□ -1.39
NKX6-1P78426 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC6.39□□□□□ -1.39
NKX6-1P78426 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC6.39□□□□□ -1.39
NKX6-1P78426 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC6.39□□□□□ -1.39
NKX6-1P78426 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.39□□□□□ -1.39
NKX6-1P78426 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC6.39□□□□□ -1.39
NKX6-1P78426 OR7E161P-201ENST00000533722 967 ntBASIC6.39□□□□□ -1.39
NKX6-1P78426 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC6.39□□□□□ -1.39
NKX6-1P78426 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC6.39□□□□□ -1.39
NKX6-1P78426 AC089984.3-201ENST00000552838 363 ntBASIC6.39□□□□□ -1.39
NKX6-1P78426 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.39□□□□□ -1.39
NKX6-1P78426 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC6.39□□□□□ -1.39
NKX6-1P78426 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.39□□□□□ -1.39
NKX6-1P78426 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
NKX6-1P78426 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.39□□□□□ -1.39
NKX6-1P78426 DHFRP1-201ENST00000579682 559 ntBASIC6.39□□□□□ -1.39
NKX6-1P78426 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.39□□□□□ -1.39
NKX6-1P78426 AC026741.1-201ENST00000605892 482 ntBASIC6.39□□□□□ -1.39
NKX6-1P78426 AP001033.2-201ENST00000609701 1003 ntBASIC6.39□□□□□ -1.39
NKX6-1P78426 AP005229.2-201ENST00000609980 697 ntBASIC6.39□□□□□ -1.39
NKX6-1P78426 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.39□□□□□ -1.39
NKX6-1P78426 AC097520.1-201ENST00000624435 385 ntBASIC6.39□□□□□ -1.39
NKX6-1P78426 AL162377.2-201ENST00000624532 337 ntBASIC6.39□□□□□ -1.39
NKX6-1P78426 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC6.39□□□□□ -1.39
NKX6-1P78426 AC008993.2-201ENST00000631744 806 ntBASIC6.39□□□□□ -1.39
NKX6-1P78426 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.39□□□□□ -1.39
NKX6-1P78426 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NKX6-1P78426 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
NKX6-1P78426 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC6.39□□□□□ -1.39
NKX6-1P78426 PPHLN1-202ENST00000317560 1359 ntTSL 2 BASIC6.39□□□□□ -1.39
NKX6-1P78426 AC090774.4-201ENST00000578888 1372 ntBASIC6.39□□□□□ -1.39
NKX6-1P78426 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC6.39□□□□□ -1.39
NKX6-1P78426 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NKX6-1P78426 HDAC1P1-201ENST00000455482 1445 ntBASIC6.39□□□□□ -1.39
NKX6-1P78426 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
NKX6-1P78426 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.39□□□□□ -1.39
NKX6-1P78426 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NKX6-1P78426 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC6.39□□□□□ -1.39
NKX6-1P78426 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
NKX6-1P78426 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NKX6-1P78426 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
NKX6-1P78426 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
NKX6-1P78426 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
NKX6-1P78426 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
NKX6-1P78426 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NKX6-1P78426 IARS-205ENST00000443024 4341 ntTSL 5 BASIC6.38□□□□□ -1.39
NKX6-1P78426 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NKX6-1P78426 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NKX6-1P78426 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NKX6-1P78426 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NKX6-1P78426 RNA5SP238-201ENST00000365464 120 ntBASIC6.38□□□□□ -1.39
NKX6-1P78426 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.38□□□□□ -1.39
NKX6-1P78426 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NKX6-1P78426 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NKX6-1P78426 NPM1P38-201ENST00000403835 865 ntBASIC6.38□□□□□ -1.39
NKX6-1P78426 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NKX6-1P78426 RNU4-27P-201ENST00000410889 139 ntBASIC6.38□□□□□ -1.39
NKX6-1P78426 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.38□□□□□ -1.39
NKX6-1P78426 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.38□□□□□ -1.39
NKX6-1P78426 CBX1P3-201ENST00000413296 527 ntBASIC6.38□□□□□ -1.39
NKX6-1P78426 NRIR-202ENST00000414795 506 ntTSL 3 BASIC6.38□□□□□ -1.39
NKX6-1P78426 AL158827.1-201ENST00000416300 391 ntBASIC6.38□□□□□ -1.39
NKX6-1P78426 AL390840.1-201ENST00000420303 988 ntBASIC6.38□□□□□ -1.39
NKX6-1P78426 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC6.38□□□□□ -1.39
NKX6-1P78426 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC6.38□□□□□ -1.39
NKX6-1P78426 CLNS1AP1-201ENST00000435954 682 ntBASIC6.38□□□□□ -1.39
NKX6-1P78426 Z80107.1-201ENST00000436830 412 ntBASIC6.38□□□□□ -1.39
NKX6-1P78426 AL138787.1-202ENST00000437804 898 ntBASIC6.38□□□□□ -1.39
NKX6-1P78426 AC002486.2-201ENST00000447806 590 ntBASIC6.38□□□□□ -1.39
NKX6-1P78426 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
NKX6-1P78426 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC6.38□□□□□ -1.39
NKX6-1P78426 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC6.38□□□□□ -1.39
NKX6-1P78426 RN7SL152P-201ENST00000484176 298 ntBASIC6.38□□□□□ -1.39
NKX6-1P78426 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC6.38□□□□□ -1.39
NKX6-1P78426 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC6.38□□□□□ -1.39
NKX6-1P78426 OR7E13P-201ENST00000526052 910 ntBASIC6.38□□□□□ -1.39
NKX6-1P78426 OR5M4P-201ENST00000529436 925 ntBASIC6.38□□□□□ -1.39
NKX6-1P78426 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.38□□□□□ -1.39
NKX6-1P78426 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC6.38□□□□□ -1.39
NKX6-1P78426 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC6.38□□□□□ -1.39
NKX6-1P78426 IGLJCOR18-201ENST00000584002 424 ntBASIC6.38□□□□□ -1.39
NKX6-1P78426 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC6.38□□□□□ -1.39
NKX6-1P78426 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NKX6-1P78426 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NKX6-1P78426 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.38□□□□□ -1.39
NKX6-1P78426 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms