Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC7.89□□□□□ -1.15
RHBDL3P58872 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RHBDL3P58872 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RHBDL3P58872 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC7.89□□□□□ -1.15
RHBDL3P58872 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RHBDL3P58872 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC7.89□□□□□ -1.15
RHBDL3P58872 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.89□□□□□ -1.15
RHBDL3P58872 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
RHBDL3P58872 AL355974.1-201ENST00000618896 1708 ntBASIC7.89□□□□□ -1.15
RHBDL3P58872 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RHBDL3P58872 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.89□□□□□ -1.15
RHBDL3P58872 OFD1P17-201ENST00000437639 3018 ntBASIC7.89□□□□□ -1.15
RHBDL3P58872 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.89□□□□□ -1.15
RHBDL3P58872 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RHBDL3P58872 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC7.88□□□□□ -1.15
RHBDL3P58872 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RHBDL3P58872 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RHBDL3P58872 CR382285.2-201ENST00000624662 1495 ntBASIC7.88□□□□□ -1.15
RHBDL3P58872 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.88□□□□□ -1.15
RHBDL3P58872 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.88□□□□□ -1.15
RHBDL3P58872 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
RHBDL3P58872 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RHBDL3P58872 AL391262.1-201ENST00000556558 1992 ntBASIC7.88□□□□□ -1.15
RHBDL3P58872 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.88□□□□□ -1.15
RHBDL3P58872 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC7.88□□□□□ -1.15
RHBDL3P58872 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RHBDL3P58872 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RHBDL3P58872 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
RHBDL3P58872 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
RHBDL3P58872 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
RHBDL3P58872 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
RHBDL3P58872 PSMA6P1-201ENST00000400275 741 ntBASIC7.88□□□□□ -1.15
RHBDL3P58872 SNORA11.3-201ENST00000408471 128 ntBASIC7.88□□□□□ -1.15
RHBDL3P58872 C2orf76-203ENST00000409523 747 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RHBDL3P58872 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC7.88□□□□□ -1.15
RHBDL3P58872 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC7.88□□□□□ -1.15
RHBDL3P58872 VN1R20P-201ENST00000425215 966 ntBASIC7.88□□□□□ -1.15
RHBDL3P58872 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC7.88□□□□□ -1.15
RHBDL3P58872 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.88□□□□□ -1.15
RHBDL3P58872 MORF4L1P5-201ENST00000433352 961 ntBASIC7.88□□□□□ -1.15
RHBDL3P58872 AC245452.2-201ENST00000435222 392 ntBASIC7.88□□□□□ -1.15
RHBDL3P58872 OR6C72P-201ENST00000451403 892 ntBASIC7.88□□□□□ -1.15
RHBDL3P58872 CCNJP2-201ENST00000457810 1163 ntBASIC7.88□□□□□ -1.15
RHBDL3P58872 AC021074.2-201ENST00000468434 172 ntBASIC7.88□□□□□ -1.15
RHBDL3P58872 RPS27P20-201ENST00000492051 246 ntBASIC7.88□□□□□ -1.15
RHBDL3P58872 RPL5P14-201ENST00000494197 878 ntBASIC7.88□□□□□ -1.15
RHBDL3P58872 H3F3AP3-201ENST00000497682 407 ntBASIC7.88□□□□□ -1.15
RHBDL3P58872 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC7.88□□□□□ -1.15
RHBDL3P58872 AC091874.2-201ENST00000505889 720 ntBASIC7.88□□□□□ -1.15
RHBDL3P58872 AC112484.3-201ENST00000505910 329 ntBASIC7.88□□□□□ -1.15
RHBDL3P58872 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RHBDL3P58872 IGHVII-60-1-201ENST00000519079 256 ntBASIC7.88□□□□□ -1.15
RHBDL3P58872 AC005363.1-201ENST00000530779 351 ntBASIC7.88□□□□□ -1.15
RHBDL3P58872 RPL3P13-201ENST00000550415 216 ntBASIC7.88□□□□□ -1.15
RHBDL3P58872 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC7.88□□□□□ -1.15
RHBDL3P58872 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC7.88□□□□□ -1.15
RHBDL3P58872 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC7.88□□□□□ -1.15
RHBDL3P58872 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RHBDL3P58872 RN7SL199P-201ENST00000578752 281 ntBASIC7.88□□□□□ -1.15
RHBDL3P58872 RN7SL656P-201ENST00000579044 281 ntBASIC7.88□□□□□ -1.15
RHBDL3P58872 RN7SL230P-201ENST00000580835 303 ntBASIC7.88□□□□□ -1.15
RHBDL3P58872 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC7.88□□□□□ -1.15
RHBDL3P58872 RN7SL404P-201ENST00000582421 281 ntBASIC7.88□□□□□ -1.15
RHBDL3P58872 SYPL1P2-201ENST00000582878 727 ntBASIC7.88□□□□□ -1.15
RHBDL3P58872 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC7.88□□□□□ -1.15
RHBDL3P58872 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC7.88□□□□□ -1.15
RHBDL3P58872 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC7.88□□□□□ -1.15
RHBDL3P58872 uc_338.31-201ENST00000615595 186 ntBASIC7.88□□□□□ -1.15
RHBDL3P58872 MIR6721-201ENST00000617181 87 ntBASIC7.88□□□□□ -1.15
RHBDL3P58872 SNORA11.6-201ENST00000619030 128 ntBASIC7.88□□□□□ -1.15
RHBDL3P58872 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
RHBDL3P58872 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC7.88□□□□□ -1.15
RHBDL3P58872 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC7.88□□□□□ -1.15
RHBDL3P58872 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.88□□□□□ -1.15
RHBDL3P58872 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RHBDL3P58872 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RHBDL3P58872 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RHBDL3P58872 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RHBDL3P58872 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.88□□□□□ -1.15
RHBDL3P58872 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RHBDL3P58872 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
RHBDL3P58872 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RHBDL3P58872 MFSD8-217ENST00000641178 4374 ntBASIC7.87□□□□□ -1.15
RHBDL3P58872 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.87□□□□□ -1.15
RHBDL3P58872 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RHBDL3P58872 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RHBDL3P58872 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
RHBDL3P58872 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
RHBDL3P58872 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RHBDL3P58872 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RHBDL3P58872 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
RHBDL3P58872 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RHBDL3P58872 RNA5SP485-201ENST00000365053 119 ntBASIC7.87□□□□□ -1.15
RHBDL3P58872 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RHBDL3P58872 AC003045.1-201ENST00000398779 713 ntBASIC7.87□□□□□ -1.15
RHBDL3P58872 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC7.87□□□□□ -1.15
RHBDL3P58872 DUTP4-201ENST00000424782 475 ntBASIC7.87□□□□□ -1.15
RHBDL3P58872 RPSAP40-201ENST00000442343 891 ntBASIC7.87□□□□□ -1.15
RHBDL3P58872 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC7.87□□□□□ -1.15
RHBDL3P58872 TVP23CP1-201ENST00000450317 639 ntBASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms